G147812


Basic Information

Item Value
gene id G147812
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 44876470 ~ 44876796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU169532
tgtatttattgtgatgacataggctatattaaatatattaagaatgtagatgttccaaagatccgcatcagtggcttgtagactATGCATGGAAGGTCGAGATGCTTAacgtgtttgttaattaacggtcaattatcTTGAGAACGGCAGCTATTTGAATGACAATCACCGACTGACAAAATATCATGACCGCCAAAGCCCTAGTCCAATGTGGCTCCTTTCCAGTTTGAGTCCTGATCCAATTAATGGACCAGACATTGTTCTTTCAAATCTGTTCAGACTAACCAGACCCGATATGTAAAATAATCTTAGAACAAATCCAcccac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605384, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169532 True 327 lncRNA 0.39 1 44876470 44876796

Neighbor

gene id symbol gene type direction distance location
LOC118940389 NA coding downstream 138492 44730092 ~ 44737978 (-)
LOC110490449 scmh1 coding downstream 269605 44571948 ~ 44606865 (-)
LOC110490352 NA coding downstream 412021 44434790 ~ 44464449 (-)
LOC110490335 ptpru coding downstream 453585 44084560 ~ 44422885 (-)
LOC118940359 NA coding downstream 948189 43924190 ~ 43928281 (-)
LOC110501628 LOC106588271 coding upstream 246917 45123713 ~ 45124844 (-)
LOC110490531 LOC106560723 coding upstream 257680 45134476 ~ 45168260 (-)
LOC118936755 LOC106560723 coding upstream 294402 45171198 ~ 45171856 (-)
si:ch211-272n13.3 LOC106560721 coding upstream 401598 45278394 ~ 45394968 (-)
ldha ldha coding upstream 592446 45469242 ~ 45491918 (-)
G147808 NA non-coding downstream 2223 44874031 ~ 44874247 (-)
G147804 NA non-coding downstream 5068 44870880 ~ 44871402 (-)
G147803 NA non-coding downstream 5796 44870148 ~ 44870674 (-)
G147802 NA non-coding downstream 7757 44868473 ~ 44868713 (-)
G147753 NA non-coding downstream 10521 44865612 ~ 44865949 (-)
G148011 NA non-coding upstream 290450 45167246 ~ 45171077 (-)
G148014 NA non-coding upstream 296894 45173690 ~ 45173929 (-)
G148015 NA non-coding upstream 297720 45174516 ~ 45174727 (-)
G148104 NA non-coding upstream 380333 45257129 ~ 45257400 (-)
G148282 NA non-coding upstream 396640 45273436 ~ 45273702 (-)
G147800 NA other downstream 12911 44863085 ~ 44863559 (-)
LOC110490298 LOC106605170 other downstream 1092751 43776063 ~ 43783884 (-)
LOC110490183 LOC106605015 other downstream 1484341 43372725 ~ 43392160 (-)
tmem86a tmem86a other upstream 1967384 46844180 ~ 46921608 (-)
G150290 NA other upstream 1969356 46846152 ~ 46849616 (-)
G150618 NA other upstream 2087938 46964734 ~ 46993665 (-)
G150675 LOC100653436 other upstream 2318097 47194893 ~ 47205433 (-)

Expression


Co-expression Network