G202844


Basic Information

Item Value
gene id G202844
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 91252360 ~ 91254789 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU229609
GCAGCTTCACACACCCCTCTATATTCCAATAATGTCCTGTAAGTGGAAGCTAAAAAGTGCTTGTGATTTAAGGACCATACAGTTGGTTCCCCAAGATATGTCAATACATTGTTACCCAgagccttatatatatatatatatatatattaattaaaaaaacaaacatatacacacacacacatacggctCCGTTGTCATCTATTCATCTAGGACTTTAGCCTACTTCAAGCTTAAGTTACCACTGTTACTGTCAAGGAGAATCTGGAAACACATTGGCCTATGTCAGCCATAAAGATATGACAAATCACAATGGATTGACATAGGACCGTGTTATCATCACCATAGTAATATCACCACTGTGGATCGGAACACTTATTTACATTCAACATTTTGAGCATAAAGAGTAACCCACTTTTCCTTGATTTTGCTTTGTTGAAGCCATTCTTGTTGCATAATATCCACGGTCTTAATCTGAAACGAGAAGCACCCCCTTCTGCAATCACACTCTCCACTTTGGCGGCTTGACAACGATGAATCTTTAAAATAATAAtagggaggggtggagaaaaCGGTGCTTTACTAAAAGAACTTCAGTGTTGTATTTTTGGTGGGCACAAAAGaagaaatgtaaaataaaaatataaaaaaaggtTATTTGAAAGCGTGAGAGAGCCAATGATATCAGGTACGACAGAGTAGCTATCTGAACGTACACTTTTCCTTCGTGCTAGAGAAGACTAAAAGGTAGTCTATCTACGACGTCATTCTTGAACTCGATCTGTAGCGGCCGAAATGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229609 True 796 lncRNA 0.38 3 91252360 91254789

Neighbor

gene id symbol gene type direction distance location
LOC110499641 LOC106561583 coding upstream 12623 91235465 ~ 91239737 (+)
cep290 cep290 coding upstream 39091 91157461 ~ 91213269 (+)
kitlga LOC106561562 coding upstream 281042 90938346 ~ 90971318 (+)
si:dkey-106n21.1 LOC106561561 coding upstream 384035 90793248 ~ 90868325 (+)
dusp6 dus6 coding upstream 546335 90701413 ~ 90706025 (+)
mgat4c LOC106561589 coding downstream 111493 91366282 ~ 91543765 (+)
rassf9 rassf9 coding downstream 327795 91582584 ~ 91591130 (+)
slc6a15 LOC106561596 coding downstream 500170 91754959 ~ 91779981 (+)
LOC110499735 LOC106561597 coding downstream 582025 91836814 ~ 91852352 (+)
LOC110502363 LOC106561595 coding downstream 599063 91853852 ~ 91933354 (+)
G202656 yo84 non-coding upstream 199607 90956410 ~ 91052753 (+)
G202732 NA non-coding upstream 208134 91043292 ~ 91044226 (+)
G202558 NA non-coding upstream 462693 90789452 ~ 90789667 (+)
G202555 NA non-coding upstream 465043 90787038 ~ 90787317 (+)
G203197 NA non-coding downstream 24962 91279751 ~ 91279959 (+)
G203251 NA non-coding downstream 113770 91368559 ~ 91369003 (+)
G203281 NA non-coding downstream 157224 91412013 ~ 91413548 (+)
G203415 NA non-coding downstream 363573 91618362 ~ 91644022 (+)
G203503 NA non-coding downstream 513971 91768760 ~ 91769152 (+)
G202185 NA other upstream 534939 90716942 ~ 90717421 (+)
G202039 NA other upstream 804787 90447118 ~ 90447573 (+)
LOC110499234 rbl2 other upstream 1829922 89395057 ~ 89422438 (+)
G199223 hipk3 other upstream 3384393 87866877 ~ 87867967 (+)
G203414 NA other downstream 367212 91622001 ~ 91624293 (+)
G203438 LOC106561592 other downstream 414047 91668836 ~ 91671899 (+)
G203551 NA other downstream 572060 91826849 ~ 91847400 (+)
G203646 cpa2 other downstream 766966 92021755 ~ 92024742 (+)

Expression


Co-expression Network