G203697


Basic Information

Item Value
gene id G203697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92099357 ~ 92099781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU230542
cctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccccctttccctatacaactgactaggtgtccccctttccctatacaactgactaggtatcacctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccccctttccctatacaactgactaggtatccccctttccctatacaactgactaggtatcccccttccctatacaactgactaggtatccccttttccctAT
>TU230544
cctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccccctttccctatacaactgactaggtgtccccctttccctatacaactgactaggtatcacctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccccctttccctatacaactgactaggtatcccccttccctatacaactgactaggtatccccttttccctAT
>TU230545
cctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccccctttccctatacaactgactaggtgtccccctttccctatacaactgactaggtgtccccctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccctttccctatacaactgactaggtatcccatttccctatacaactgactaggtatccccctttccctatacaactgactaggtatccccttttccctAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230542 False 279 lncRNA 0.59 2 92099357 92099781
TU230544 False 249 lncRNA 0.46 2 92099357 92099781
TU230545 True 307 lncRNA 0.54 3 92099357 92099781

Neighbor

gene id symbol gene type direction distance location
borcs5 LOC106561602 coding upstream 27040 92065598 ~ 92072317 (+)
LOC110502379 NA coding upstream 35649 92057562 ~ 92063708 (+)
smc1b LOC106561601 coding upstream 50127 92028434 ~ 92049230 (+)
LOC110502371 LOC106561599 coding upstream 91290 91937152 ~ 92008067 (+)
LOC110502363 LOC106561595 coding upstream 166003 91853852 ~ 91933354 (+)
LOC110499816 LOC106561604 coding downstream 23279 92123060 ~ 92129748 (+)
LOC110499833 LOC106561605 coding downstream 39299 92139080 ~ 92151823 (+)
LOC110499877 LOC106561610 coding downstream 288328 92388109 ~ 92392385 (+)
LOC110499906 LOC106561611 coding downstream 354544 92454325 ~ 92460616 (+)
LOC110502389 LOC106561615 coding downstream 416043 92515824 ~ 92680198 (+)
G203679 NA non-coding upstream 20424 92078722 ~ 92078933 (+)
G203674 NA non-coding upstream 24497 92074628 ~ 92074860 (+)
G203671 NA non-coding upstream 33876 92065260 ~ 92065481 (+)
G203629 NA non-coding upstream 105653 91990872 ~ 91993704 (+)
G203561 NA non-coding upstream 179538 91918870 ~ 91919819 (+)
G204211 NA non-coding downstream 18441 92118222 ~ 92118699 (+)
G204214 NA non-coding downstream 22074 92121855 ~ 92122169 (+)
G204226 NA non-coding downstream 33236 92133017 ~ 92133229 (+)
G204239 ckap5 non-coding downstream 53619 92153400 ~ 92154538 (+)
G204277 NA non-coding downstream 101643 92201424 ~ 92202395 (+)
G203646 cpa2 other upstream 74615 92021755 ~ 92024742 (+)
G203551 NA other upstream 251957 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 427458 91668836 ~ 91671899 (+)
G203414 NA other upstream 475064 91622001 ~ 91624293 (+)
mgat4c LOC106561589 other upstream 559984 91366282 ~ 91543765 (+)
G204240 ckap5 other downstream 57494 92157275 ~ 92159903 (+)
G204593 NA other downstream 581565 92681346 ~ 92682355 (+)
LOC110499942 LOC106561637 other downstream 737643 92837196 ~ 92839440 (+)
G205404 NA other downstream 1271612 93371393 ~ 93388550 (+)
G205482 NA other downstream 1301836 93401617 ~ 93402234 (+)

Expression


Co-expression Network