G204226


Basic Information

Item Value
gene id G204226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92133017 ~ 92133229 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231112
gtttaaagtggctagtgatatattttccatcaatttccatcaattcccattattaaagtggctggagttgagtcagtgtgttggcagcagccactctatgttagtggtggctctttaacagtctgatggcattgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtgaacaggcagtggctcgggtgggtgttgtc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231112 True 213 lncRNA 0.47 1 92133017 92133229

Neighbor

gene id symbol gene type direction distance location
LOC110499816 LOC106561604 coding upstream 3269 92123060 ~ 92129748 (+)
LOC110499798 LOC106561603 coding upstream 16606 92086314 ~ 92116411 (+)
borcs5 LOC106561602 coding upstream 60700 92065598 ~ 92072317 (+)
LOC110502379 NA coding upstream 69309 92057562 ~ 92063708 (+)
smc1b LOC106561601 coding upstream 83787 92028434 ~ 92049230 (+)
LOC110499833 LOC106561605 coding downstream 5851 92139080 ~ 92151823 (+)
LOC110499877 LOC106561610 coding downstream 254880 92388109 ~ 92392385 (+)
LOC110499906 LOC106561611 coding downstream 321096 92454325 ~ 92460616 (+)
LOC110502389 LOC106561615 coding downstream 382595 92515824 ~ 92680198 (+)
LOC118943603 NA coding downstream 508801 92642030 ~ 92643329 (+)
G204214 NA non-coding upstream 10848 92121855 ~ 92122169 (+)
G204211 NA non-coding upstream 14318 92118222 ~ 92118699 (+)
G203697 NA non-coding upstream 33236 92099357 ~ 92099781 (+)
G203679 NA non-coding upstream 54084 92078722 ~ 92078933 (+)
G203674 NA non-coding upstream 58157 92074628 ~ 92074860 (+)
G204239 ckap5 non-coding downstream 20171 92153400 ~ 92154538 (+)
G204277 NA non-coding downstream 68195 92201424 ~ 92202395 (+)
G204287 NA non-coding downstream 76070 92209299 ~ 92209553 (+)
G204309 NA non-coding downstream 94848 92228077 ~ 92228341 (+)
G204312 NA non-coding downstream 98481 92231710 ~ 92231909 (+)
G203646 cpa2 other upstream 108275 92021755 ~ 92024742 (+)
G203551 NA other upstream 285617 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 461118 91668836 ~ 91671899 (+)
G203414 NA other upstream 508724 91622001 ~ 91624293 (+)
mgat4c LOC106561589 other upstream 593644 91366282 ~ 91543765 (+)
G204240 ckap5 other downstream 24046 92157275 ~ 92159903 (+)
G204593 NA other downstream 548117 92681346 ~ 92682355 (+)
LOC110499942 LOC106561637 other downstream 704195 92837196 ~ 92839440 (+)
G205404 NA other downstream 1238164 93371393 ~ 93388550 (+)
G205482 NA other downstream 1268388 93401617 ~ 93402234 (+)

Expression


Co-expression Network