G204312


Basic Information

Item Value
gene id G204312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92231710 ~ 92231909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU231219
gtactattgtttgtataatTTGCATATCATTGTATTTAAAATGTGCTTGACTTTCCTTGtctgtcagtgtatcagtgttttgttagATGTTCTCTATTTTGTGTGGACCCACAGAGGGATGCAGTCAAAAGATAGACCAGCTCATTTCCCACACAGCATAGATCTCGTCTTCACCACTGGCTCCACCAAGGCACTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231219 True 200 lncRNA 0.40 1 92231710 92231909

Neighbor

gene id symbol gene type direction distance location
LOC110499833 LOC106561605 coding upstream 79887 92139080 ~ 92151823 (+)
LOC110499816 LOC106561604 coding upstream 101962 92123060 ~ 92129748 (+)
LOC110499798 LOC106561603 coding upstream 115299 92086314 ~ 92116411 (+)
borcs5 LOC106561602 coding upstream 159393 92065598 ~ 92072317 (+)
LOC110502379 NA coding upstream 168002 92057562 ~ 92063708 (+)
LOC110499877 LOC106561610 coding downstream 156200 92388109 ~ 92392385 (+)
LOC110499906 LOC106561611 coding downstream 222416 92454325 ~ 92460616 (+)
LOC110502389 LOC106561615 coding downstream 283915 92515824 ~ 92680198 (+)
LOC118943603 NA coding downstream 410121 92642030 ~ 92643329 (+)
LOC118943605 NA coding downstream 432916 92664825 ~ 92669744 (+)
G204309 NA non-coding upstream 3369 92228077 ~ 92228341 (+)
G204287 NA non-coding upstream 22157 92209299 ~ 92209553 (+)
G204277 NA non-coding upstream 29315 92201424 ~ 92202395 (+)
G204239 ckap5 non-coding upstream 77172 92153400 ~ 92154538 (+)
G204226 NA non-coding upstream 98481 92133017 ~ 92133229 (+)
G204313 NA non-coding downstream 1383 92233292 ~ 92300447 (+)
G204427 NA non-coding downstream 98232 92330141 ~ 92443833 (+)
G204578 NA non-coding downstream 212248 92444157 ~ 92444434 (+)
G204598 NA non-coding downstream 239397 92471306 ~ 92471516 (+)
G204601 NA non-coding downstream 245093 92477002 ~ 92495492 (+)
G204240 ckap5 other upstream 71807 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 206968 92021755 ~ 92024742 (+)
G203551 NA other upstream 384310 91826849 ~ 91847400 (+)
G203438 LOC106561592 other upstream 559811 91668836 ~ 91671899 (+)
G203414 NA other upstream 607417 91622001 ~ 91624293 (+)
G204593 NA other downstream 449437 92681346 ~ 92682355 (+)
LOC110499942 LOC106561637 other downstream 605515 92837196 ~ 92839440 (+)
G205404 NA other downstream 1139484 93371393 ~ 93388550 (+)
G205482 NA other downstream 1169708 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 1564173 93796082 ~ 93798936 (+)

Expression


Co-expression Network