G209901



Basic Information


Item Value
gene id G209901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97782057 ~ 97782475 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU237752
CGTGTGTATCGTTACATGGCAGATATCACCCCGTGTAAACAAATGTAGAGCAAGCAGGGTTTTACGCACGCCTCTAGGGAGAGGGAACGCAACACAGGGGTCTAGAACACAGAACCCTCCCTTGAGGTTCTTTAGAGAGCAACCAGGTCCAGTAGAGTAGCAGGACGAAAAACTGAATGTCACGGAAGAGGTACACTGAGAAAAACTTACCTGTGTGAAAGAGagtattttttaaaaaaaactttatttaactaggcaagtcagttaactgccttgttcaggggaagaacgacggATTTGTAaattgtcagctcgggatttgaacttgcaacctttcagttcctagcccaacgctctaaccactaggctagcctgccgcccctccactctaaccactaggctacctgccacccctccac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU237752 True 419 lncRNA 0.45 1 97782057 97782475

Neighbor


gene id symbol gene type direction distance location
LOC118943870 NA coding downstream 21257 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 24394 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 26330 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 58874 97699305 ~ 97723186 (-)
LOC118944209 NA coding downstream 62284 97719674 ~ 97719773 (-)
LOC118936884 NA coding upstream 345473 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 530548 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 641540 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 692259 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 739523 98521998 ~ 98535690 (-)
G209838 NA non-coding downstream 1499 97779096 ~ 97780558 (-)
G209844 NA non-coding downstream 10607 97726939 ~ 97771450 (-)
G209851 NA non-coding downstream 12864 97764289 ~ 97769193 (-)
G209893 NA non-coding downstream 31073 97714191 ~ 97750984 (-)
G209902 NA non-coding upstream 226 97782701 ~ 97782951 (-)
G209907 NA non-coding upstream 8698 97791173 ~ 97791393 (-)
G209914 NA non-coding upstream 18522 97800997 ~ 97801343 (-)
G209915 NA non-coding upstream 19126 97801601 ~ 97801957 (-)
G209919 NA non-coding upstream 31084 97813559 ~ 97855601 (-)
G209841 NA other downstream 162845 97618859 ~ 97619212 (-)
G209802 NA other downstream 279663 97501172 ~ 97502394 (-)
G209560 NA other downstream 364869 97416821 ~ 97417188 (-)
G208658 NA other downstream 1359833 96421866 ~ 96422224 (-)
G208472 NA other downstream 1647585 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 1135973 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 1159999 98936783 ~ 98944041 (-)
G210765 NA other upstream 1243257 99025732 ~ 99026118 (-)
G211127 NA other upstream 1340758 99123233 ~ 99123658 (-)

Expression



Co-expression Network