Gene
RNA
| Item | Value |
|---|---|
| gene id | G209915 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 97801601 ~ 97801957 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| remodeling and spacing factor 1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU237768 | True | 357 | lncRNA | 0.47 | 1 | 97801601 | 97801957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943870 | NA | coding | downstream | 40801 | 97759882 ~ 97761086 (-) |
| LOC118944211 | NA | coding | downstream | 43938 | 97757564 ~ 97757663 (-) |
| LOC118944208 | NA | coding | downstream | 45874 | 97755630 ~ 97755727 (-) |
| LOC118943868 | NA | coding | downstream | 78418 | 97699305 ~ 97723186 (-) |
| LOC118944209 | NA | coding | downstream | 81828 | 97719674 ~ 97719773 (-) |
| LOC118936884 | NA | coding | upstream | 325991 | 98127948 ~ 98145517 (-) |
| LOC110500713 | LOC106561713 | coding | upstream | 511066 | 98313023 ~ 98352485 (-) |
| lmo2 | rbtn2 | coding | upstream | 622058 | 98424015 ~ 98426658 (-) |
| LOC110500720 | LOC106561717 | coding | upstream | 672777 | 98474734 ~ 98513861 (-) |
| edc3 | LOC106561715 | coding | upstream | 720041 | 98521998 ~ 98535690 (-) |
| G209914 | NA | non-coding | downstream | 258 | 97800997 ~ 97801343 (-) |
| G209907 | NA | non-coding | downstream | 10208 | 97791173 ~ 97791393 (-) |
| G209902 | NA | non-coding | downstream | 18650 | 97782701 ~ 97782951 (-) |
| G209901 | NA | non-coding | downstream | 19126 | 97782057 ~ 97782475 (-) |
| G209838 | NA | non-coding | downstream | 21043 | 97779096 ~ 97780558 (-) |
| G209919 | NA | non-coding | upstream | 11602 | 97813559 ~ 97855601 (-) |
| G209920 | NA | non-coding | upstream | 15915 | 97817872 ~ 97836595 (-) |
| G209922 | NA | non-coding | upstream | 24478 | 97826435 ~ 97847748 (-) |
| G209925 | NA | non-coding | upstream | 30547 | 97832504 ~ 97835140 (-) |
| G209978 | NA | non-coding | upstream | 127387 | 97929344 ~ 97929784 (-) |
| G209841 | NA | other | downstream | 182389 | 97618859 ~ 97619212 (-) |
| G209802 | NA | other | downstream | 299207 | 97501172 ~ 97502394 (-) |
| G209560 | NA | other | downstream | 384413 | 97416821 ~ 97417188 (-) |
| G208658 | NA | other | downstream | 1379377 | 96421866 ~ 96422224 (-) |
| G208472 | NA | other | downstream | 1667129 | 96134077 ~ 96134472 (-) |
| LOC118943885 | LOC106561728 | other | upstream | 1116491 | 98914015 ~ 98946069 (-) |
| LOC118943882 | LOC106561728 | other | upstream | 1140517 | 98936783 ~ 98944041 (-) |
| G210765 | NA | other | upstream | 1223775 | 99025732 ~ 99026118 (-) |
| G211127 | NA | other | upstream | 1321276 | 99123233 ~ 99123658 (-) |
