G209983


Basic Information

Item Value
gene id G209983
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97936615 ~ 97937268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237849
ggaacacaggagtgacggttgcttacctacacacacacacacatacctttttccCCTTCGCACCATGGGTtagtaagtcagcatttcactgtgaggtctacctgttgtagtcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctaccacacctgttgtattcagcatttcactgtgaggtctacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgatgtattcagcatttcactgtaaggtctactacacctgatgtattcagcatttcactgtaaggtctactacacctgttgtaaatcaactttgatttgataatgggcctctgtacgcctatgtagatattccattcaaattatttttttaaacagccgtttccagctacaatagtcatttacaacattaatgtattttctgatcaatttgatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237849 True 578 lncRNA 0.34 2 97936615 97937268

Neighbor

gene id symbol gene type direction distance location
LOC118943870 NA coding downstream 175815 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 178952 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 180888 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 213432 97699305 ~ 97723186 (-)
LOC118944209 NA coding downstream 216842 97719674 ~ 97719773 (-)
LOC118936884 NA coding upstream 190680 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 375755 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 486747 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 537466 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 584730 98521998 ~ 98535690 (-)
G209982 NA non-coding downstream 1195 97934642 ~ 97935420 (-)
G209978 NA non-coding downstream 6831 97929344 ~ 97929784 (-)
G209919 NA non-coding downstream 81014 97813559 ~ 97855601 (-)
G210000 NA non-coding upstream 31483 97968751 ~ 97969143 (-)
G210005 NA non-coding upstream 35865 97973133 ~ 98017867 (-)
G210019 NA non-coding upstream 55370 97992638 ~ 97994453 (-)
G210009 NA non-coding upstream 59060 97996328 ~ 97998836 (-)
G210006 NA non-coding upstream 73508 98010776 ~ 98015122 (-)
G209841 NA other downstream 317403 97618859 ~ 97619212 (-)
G209802 NA other downstream 434221 97501172 ~ 97502394 (-)
G209560 NA other downstream 519427 97416821 ~ 97417188 (-)
G208658 NA other downstream 1514391 96421866 ~ 96422224 (-)
G208472 NA other downstream 1802143 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 981180 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 1005206 98936783 ~ 98944041 (-)
G210765 NA other upstream 1088464 99025732 ~ 99026118 (-)
G211127 NA other upstream 1185965 99123233 ~ 99123658 (-)

Expression


Co-expression Network