G210005


Basic Information

Item Value
gene id G210005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97973133 ~ 98017867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237876
ACTTTTATTTACATGTATCAAGTGTATGTTGGTTGGTGACTGTTCTTCGAAACGTTCAAGGCAAAGACTACAGATCGATATGGTGTGTATAAAAGTTGTGCCGTTGTCACCAATAAAGACGATCCTGACTAACACTGGCACGCTCTGCTGGTCACATCGAAAGTACACCGTAAAAATGAAACAAaagtccttctctctctacatttgACATCAACCATGAACACGCAAAAGAGATCATCTGTAACCAGATGGCTGTAGGGTTCAAAatctaaaatgttattggtcacatgctttTGTAAACAATTAGGTGTAGaccgacagtgaaatgcttacttaaatcTACCCCTGTtatttatgaagcatgtgacattATGTTCAAGTTAAACTTTTGCATAAATACTAAATATTTCAGTGTAATTATACAGTAGGCTGATTGACGGTGGCAAGTGACAATTAGCGTTTTCAAAGTTCtacatcttgaaaacttgattgctgcactgcaaaacattttttgggggactgtatcaacagtggactaatgaaacaaatacaacaaaatataATTTTGGGAGTGGAATTGACCTTCAAGAAACACTTGCTGAATTAAAAAGGTGATCATCCCTGAAAAATGTCTATTCCCGACGCGCTTTATATCGTCAGCTCACCCTCAATATCACGTTAGAGGATGAGCCATCTCTATCATGTACAGTATGCGTTCTCTATGCCCATTGGACAGACTGAAAAGCGGACCTGAGACCTCCCTCAGTGTTCCGACGCGGCATTAAGAACAGAGAATATATATATCTAGATGCTGATCCACACATTATACCGGTCTGTCAGCTGGACGATGGCTTCACCATGAGCAGGTCGGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGACCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTTTGATCATATAAATAGAACACGGTCGACTTGAAATGTCTGTGTTCTAGATATTTAATTTGAATTAGTGTGATTCTATTTTACTGTACCGCTCTGCCTTACCATCTTCTACCTATAGCGGACATTCTGCTGGATAAATGAACAGCTGAAAGAAACAGATAAAcacgtgacagagagagagagagagcaaagataTCCAGGTTTCACCTTAGTGCACAGGAGCAGTAACAACGTCGCCAACCAACCAACACCATAAAAATGGAACATCTTTAAACTAACAAACTCTTTGTCCTTGAGACTACAGTATATTCAAAATGAAACTACCAATAGATCACATttgaacaacaaaaacaaaacaaaaaaaaacattcaaatgaCTACATACTAATACTATAGTGTTTTAAATTACTCTGTACATCTTGGATCGGTCCCAAAAAAAGCTACTTAtttcctatacagtgcactacaggGCCCATACGACTCTACTTTTgctcaaaggtagtgcactacctatacagtgcactacaggACCCATACGACTCTACTTTTgctcaaaggtagtgcactacataggaaataggttGTTATTTGGGACGTAAGCACTAAGTCACATGACTGAGCGGAAGGGAGATACTGTACAAGAAAAACATTACTTCAAATGAAtacacactttttttttttgttgttttt
>TU237874
ACTTTTATTTACATGTATCAAGTGTATGTTGGTTGGTGACTGTTCTTCGAAACGTTCAAGGCAAAGACTACAGATCGATATGGTGTGTATAAAAGTTGTGCCGTTGTCACCAATAAAGACGATCCTGACTAACACTGGCACGCTCTGCTGGTCACATCGAAAGTACACCGTAAAAATGAAACAAaagtccttctctctctacatttgACATCAACCATGAACACGCAAAAGAGATCATCTGTAACCAGATGGCTGTAGGGTTCAAAatctaaaatgttattggtcacatgctttTGTAAACAATTAGGTGTAGaccgacagtgaaatgcttacttaaatcTACCCCTGTtatttatgaagcatgtgacattATGTTCAAGTTAAACTTTTGCATAAATACTAAATATTTCAGTGTAATTATACAGTAGGCTGATTGACGGTGGCAAGTGACAATTAGCGTTTTCAAAGTTCtacatcttgaaaacttgattgctgcactgcaaaacattttttgggggactgtatcaacagtggactaatgaaacaaatacaacaaaatataATTTTGGGAGTGGAATTGACCTTCAAGAAACACTTGCTGAATTAAAAAGGTGATCATCCCTGAAAAATGTCTATTCCCGACGCGCTTTATATCGTCAGCTCACCCTCAATATCACGTTAGAGGATGAGCCATCTCTATCATGTACAGTATGCGTTCTCTATGCCCATTGGACAGACTGAAAAGCGGACCTGAGACCTCCCTCAGTGTTCCGACGCGGCATTAAGAACAGAGAATATATATATCTAGATGCTGATCCACACATTATACCGGTCTGTCAGCTGGACGATGGCTTCACCATGAGCAGGTCGGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGACCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTTTGATCATATAAATAGAACACGGTCGACTTGAAATGTCTGTGTTCTAGATATTTAATTTGAATTAGTGTGATTCTATTTTACTGTACCGCTCTGCCTTACCATCTTCTACCTATAGCGGACATTCTGCTGGATAAATGAACAGCTGAAAGAAACAGATAAAcacgtgacagagagagagagagagcaaagataTCCAGGTTTCACCTTAGTGCACAGGAGCAGTAACAACGTCGCCAACCAACCAACACCATAAAAATGGAACATCTTTAAACTAACAAACTCTTTGTCCTTGAGACTACAGTATATTCAAAATGAAACTACCAATAGATCACATttgaacaacaaaaacaaaacaaaaaaaaacattcaaatgaCTACATACTAATACTATAGTGTTTTAAATTACTCTGTACATCTTGGATCGGTCCCAAAAAAAGCTACTTAtttcctatacagtgcactacaggGCCCATACGACTCTACTTTTgctcaaaggtagtgcactacataggaaataggttGTTATTTGGGACGTAAGCACTAAGTCACATGACTGAGCGGAAGGGAGATACTGTACAAGAAAAACATTACTTCAAATGAAtacacactttttttttgttgtttttacacagaacccccctacacacacacacacacgatagtaGAGTACAGTGTTTGGAGGACGACAACAATCTCCCAGTTCACAATCAGACCCTTTCTCATTTCCATATAGAGAACAAACG
>TU237875
ACTTTTATTTACATGTATCAAGTGTATGTTGGTTGGTGACTGTTCTTCGAAACGTTCAAGGCAAAGACTACAGATCGATATGGTGTGTATAAAAGTTGTGCCGTTGTCACCAATAAAGACGATCCTGACTAACACTGGCACGCTCTGCTGGTCACATCGAAAGTACACCGTAAAAATGAAACAAaagtccttctctctctacatttgACATCAACCATGAACACGCAAAAGAGATCATCTGTAACCAGATGGCTGTAGGGTTCAAAatctaaaatgttattggtcacatgctttTGTAAACAATTAGGTGTAGaccgacagtgaaatgcttacttaaatcTACCCCTGTtatttatgaagcatgtgacattATGTTCAAGTTAAACTTTTGCATAAATACTAAATATTTCAGTGTAATTATACAGTAGGCTGATTGACGGTGGCAAGTGACAATTAGCGTTTTCAAAGTTCtacatcttgaaaacttgattgctgcactgcaaaacattttttgggggactgtatcaacagtggactaatgaaacaaatacaacaaaatataATTTTGGGAGTGGAATTGACCTTCAAGAAACACTTGCTGAATTAAAAAGGTGATCATCCCTGAAAAATGTCTATTCCCGACGCGCTTTATATCGTCAGCTCACCCTCAATATCACGTTAGAGGATGAGCCATCTCTATCATGTACAGTATGCGTTCTCTATGCCCATTGGACAGACTGAAAAGCGGACCTGAGACCTCCCTCAGTGTTCCGACGCGGCATTAAGAACAGAGAATATATATATCTAGATGCTGATCCACACATTATACCGGTCTGTCAGCTGGACGATGGCTTCACCATGAGCAGGTCGGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCATGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGACCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCTGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTCAGATCACCTTTCAGTTTAGAGACAAGGGCAGCAGGTTTGATCATATAAATAGAACACGGTCGACTTGAAATGTCTGTGTTCTAGATATTTAATTTGAATTAGTGTGATTCTATTTTACTGTACCGCTCTGCCTTACCATCTTCTACCTATAGCGGACATTCTGCTGGATAAATGAACAGCTGAAAGAAACAGATAAAcacgtgacagagagagagagagagcaaagataTCCAGGTTTCACCTTAGTGCACAGGAGCAGTAACAACGTCGCCAACCAACCAACACCATAAAAATGGAACATCTTTAAACTAACAAACTCTTTGTCCTTGAGACTACAGTATATTCAAAATGAAACTACCAATAGATCACATttgaacaacaaaaacaaaacaaaaaaaaacattcaaatgaCTACATACTAATACTATAGTGTTTTAAATTACTCTGTACATCTTGGATCGGTCCCAAAAAAAGCTACTTAtttcctatacagtgcactacaggGCCCATACGACTCTACTTTTgctcaaaggtagtgcactacataggaaataggttGTTATTTGGGACGTAAGCACTAAGTCACATGACTGAGCGGAAGGGAGATACTGTACAAGAAAAACATTACTTCAAATGAAtacacactttttttttgttgtttttacacagaacccccctacacacacacacacacgatagtaGAGTACAGTGTTTGGAGGACGACAACAATCTCCCAGTTCACAATCAGACCCTTTCTCATTTCCATATAGAGAACAAACG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU237876 False 2111 lncRNA 0.47 3 97973133 98017867
TU237874 False 2130 lncRNA 0.41 3 98015422 98017867
TU237875 True 2277 lncRNA 0.41 3 98015422 98017867

Neighbor

gene id symbol gene type direction distance location
LOC118943870 NA coding downstream 212333 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 215470 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 217406 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 249950 97699305 ~ 97723186 (-)
LOC118944209 NA coding downstream 253360 97719674 ~ 97719773 (-)
LOC118936884 NA coding upstream 110081 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 295156 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 406148 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 456867 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 504131 98521998 ~ 98535690 (-)
G210000 NA non-coding downstream 3990 97968751 ~ 97969143 (-)
G209983 NA non-coding downstream 35865 97936615 ~ 97937268 (-)
G209982 NA non-coding downstream 37713 97934642 ~ 97935420 (-)
G209978 NA non-coding downstream 43349 97929344 ~ 97929784 (-)
G209922 NA non-coding downstream 125385 97826435 ~ 97847748 (-)
G210012 NA non-coding upstream 16362 98034229 ~ 98034917 (-)
G210030 NA non-coding upstream 26599 98044466 ~ 98048444 (-)
G210033 NA non-coding upstream 33623 98051490 ~ 98052134 (-)
G210042 NA non-coding upstream 63766 98081633 ~ 98082385 (-)
G210004 NA non-coding upstream 68111 98085978 ~ 98090437 (-)
G209841 NA other downstream 353921 97618859 ~ 97619212 (-)
G209802 NA other downstream 470739 97501172 ~ 97502394 (-)
G209560 NA other downstream 555945 97416821 ~ 97417188 (-)
G208658 NA other downstream 1550909 96421866 ~ 96422224 (-)
G208472 NA other downstream 1838661 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 900581 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 924607 98936783 ~ 98944041 (-)
G210765 NA other upstream 1007865 99025732 ~ 99026118 (-)
G211127 NA other upstream 1105366 99123233 ~ 99123658 (-)

Expression


Co-expression Network