G210006


Basic Information

Item Value
gene id G210006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98010776 ~ 98015122 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU237877
TAAGCCCCGCCCCCACATCCCTGACCAGAAAGGTAGAACGTTATACATGTATAGATCTGCCATGCTGGTTTGTCATGTAGAACTGTGAATAATGTCAGCTCTACACATTACATTACTAGCTGCGACATTGTGAACATTTCGCTTCATTCAATAAACCCCCGCTTAAATATCTGAAAGCACCCACCCACCCCTCCCAGACAACCTAACTCAGCTGCTCTCAGATCATCTTGgctcgtcctctctcctccactccctccatctcaGATCATCTTGgctcgtcctctctcctccactccctccatctcaGATCTTCTTGGCTCGTCCTCTCCCCAGGTGGTAGTAATAGAAGAGAGTGACCAGGAGGAAGAGCACCcggctgaggaggaggaggacggcaGCGTTGGGCAACAAACCCATCTCCACCAGGGTGACAGACGTAACTGCAACAAGACAGGGTTGAGACGACAGtaacaaacaaaaataacaattaaactccctctctctcacataaAGAGACGGACGGACTgactgatagatagatagataacgGACGACACTCAGTCACGGAGATATAATCCCTCATCGTTAATAACTGACTTTTCAACAGCGGTATCTGAGCCAGACTCCAAACAATACTACTACGTCTCCAACACTAGAGGGAGCCATTAGCGTATTACACAATCTGAAGAAGGTGGACAGATTGGACAGCATGACATAGAGCAATAAGGCtcattgaataataataatatacggTAATAGGTTTGCAGCATAAGCATGAATTGATTTATTAAATACCAATATGAAAGGAATGTGTGCTCTCACCTAAAAACTGGACAGCAAAGTAGCATGCCTCACTGAGCAGAGTCCATTGAATGATGACCTTCTCCTGTGTATACACACCATTCCACAAGATGAGGGAtagacctggaggggggggggggggggggggtcagaggtcatgggTTATAGTTTAGTCCATTGAATGATGACCTTCTCTTGTGTTTACACACCATTCCACAAGATGAGGGATAGAACTGTGGGAGGAAATGCCATCggtcagaggttaggggtcaAAGAGATCACGGGAGACGGGCCAAATGGTATGGAGACATTCCTATCCCAAATCTAAATAAAGCTGAAAACTAGACCCCCATCTTCATAAAGCTGAAAACTATACCCCCATCTTCATTCTTCATAAAGCTGAAAACTATACCCCCATCTTCATTCTTCATAAATCTGAAAACTATACCCCCATCTTCACTCTTCATAAAGCTGAAAACTATACCCCCATCTTCATAAAGCTGACAACTATACCCCCATCTTCATAAAGCTGAAAACTATACCCCCATCTTCATTCTTCATAAAGCTGAAAACTATTCCCCCATCTTCATTCACTGGGCATTCTTCATAAAGCTGACAACTATACCCCCATCTTCATTCTTCATAAAGCTGAAAACTATACCCCCATCTTCATTCACTGGGCATTCTTCATAAAGCTGAAAACTAGACCCCCCATCTTCATAAAGCTGAAAACTATACCCCCATCTTCATTCGTCATAAAGCTGAAAACGATACCCCCATCTTCATTCGTCATAAAGCTGAAAACTATACCCCATCTACATTCTTCATAAAGCTGAAAACTATACCCTCATCTTCATTCTTCATCAAGCTGAAAACTATAACTCCATCTTCATTCTTCATAAAGCTGAAAACTATACCCCCATCTACATTCACAGGGCATTCTTCATAACACCTATCTACATACGATATCAAAAAAACTTAATTTCAGGACTCATGTTATCATCCATAATCTAGAATCTAGACAGTCAGGTCCAGGGCCGGTCTACCTCACGTGGGGCCCCGACCTCCAGGGGgcctaatttcctgcaattctatacttGGGAGATTGGGTTGGGGGCCCCCTTGAGGGAGGGAGGTTTTTGCCATGGGAGATTGGGTTGGGGGCCccctagagggagggaggtttttGCCATGGGAGATTGGGTTGGGGGCCccatagagggagggaggtttttGCCATGGGAGATTGGGTTGGGGGCCccctagagggagggaggtttttGCCATGGGAGATTGGGTTGGGGGCCccatagagggagggaggtttttGCCATGGGAGATTGGGTTGGGGGCCCCCTAGCGAGATCTCTCCATAAAGACCTTAGTAGTCGCAGAGTAATTACACTATTTCTCCATAATGACCTTTAaagaggtcaacattcacaaggcagctgggcagatggattaccaggtcgtgtactcagagcatgcgtggaccaactggcaagtgtcttcactgacattttcaacctctccctgactgagtctgtaataccaacatgtttcaagcagaccatcagagtccctgtgcccaagaatgcgaaggtaacctgcctaaatgactacctacccgtagcactcacgtctgtagccatgaagtgctttgaaaggctggtcatggctcacatcaacaccatcatcccggaaaccctagacccactccaattcacataccgccccaacagatccacagaagacgcaatctcaatcacactccacactgcccactggacctgagactggggtgaaggttcactttccaacatgacaacgaccctaagcacacagtcaagacaatgctggagaggcttcgggacaagtctctgaatgtccttaagtggcccagccagagcccggacttgaacccgatcaaacatctctggagaaaactgaaaatatctgtgcaacgaccctccccatccaacttgacagagcttgagagaatctgcagagaagaatgagagaaacaccccaaatacaggcgtgacaagtttgtagcgtcatttccaagaagactcgaggctgtaatcgctgacaaaggtgcttcaacagtacagagtaaagtgtctgaatacttatgtaaatgtcatatttctgtttttaatttgtaataaatgtgaaaaaaatgtataaaaatctgtttttgtcttgtcattttggggtattgtgatgtcattttggagtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcaggctgtaacgcaacaaaatgtgggaaaagtcaaggggtctgaaatactttctgaatgtataTCGCCGTTCTCAGGACCGTCTGAAATGTCCAAAATCTATTTCTAGGAAGGACAAAAAACAGTGTCAAAGacaccagtcacccaagtcattaacgagtcactttacccttacctacatgtacaaattacctcaccTAACCTGTACCCCGAAACGTTGACTCGGtagcggtaccccctgtacagaacctcattattgttatgtcattttattgtgttactttttataaaaatgtattttatttagcgaatattttcttaactatttcttgaactgcattgtgggttaagggcttgtaagtacgcatttcacagtaaggtctactacacctgagtTATTCAGCGCATgtaactaatacaatttgattccaTAATGACCTCAGTGATCCCAGGTTAATGTCACTACCTCTCCATAAAGACCACACAGCTTTTCTGTCTATGGTGTGTCACCATAACCTGTTAAGagaaacagacctgggttcaacttTTGAGACAAATTCATTAGTTCTAcggtgccaggcaagctcaattacAAACATAGCTAAAactatttgaaagaaaacaaatactatttgaaccctgAAGTGAACAGGACCACCGCCAACTCAACATTACTGAATGACATGATTTATTGTCAAATGAACGCAACTATAATAATCAATTCTCATCTTCAATACAATTCCTGTGGCGTGGAGGGTGGTAACGGCGAGGACCAGTCTGCGTCTGTCGTCGACACCAAAGAACTGTACGACCAGAAGTACGTctaatattttttagaaatgtttgtttatctttatttaactaggaaagtcagttaagaataaattcttattttcaatgacggtctaggaacagtgggttaactgccttgttcaggggcagaacgacagatttgtaccttgtcagctcgggggtttgaacttgcaaccttccagttactagtccaacgctctaaccaccgctCTACTCTGCCACCCTAATAATATACATGCACGGACATTTTGTTGTCGTTGTCCATTTTGTCCATGCATGTATATCTGTCTGACAGATGTTTTGTCCTGCTCTTCTGTGCCTAACGTGCACTCTATGACGACTCAAACTACAGTGAGTCACGTGCACTCTATGACGACTCAAACTACAGTGAGTCACGTGCACTCTATGACGACTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237877 True 4326 lncRNA 0.47 2 98010776 98015122

Neighbor

gene id symbol gene type direction distance location
LOC118943870 NA coding downstream 249976 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 253113 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 255049 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 287593 97699305 ~ 97723186 (-)
LOC118944209 NA coding downstream 291003 97719674 ~ 97719773 (-)
LOC118936884 NA coding upstream 112826 98127948 ~ 98145517 (-)
LOC110500713 LOC106561713 coding upstream 297901 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 408893 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 459612 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 506876 98521998 ~ 98535690 (-)
G210009 NA non-coding downstream 11940 97996328 ~ 97998836 (-)
G210019 NA non-coding downstream 16323 97992638 ~ 97994453 (-)
G210000 NA non-coding downstream 41633 97968751 ~ 97969143 (-)
G209983 NA non-coding downstream 73508 97936615 ~ 97937268 (-)
G209982 NA non-coding downstream 75356 97934642 ~ 97935420 (-)
G210012 NA non-coding upstream 19107 98034229 ~ 98034917 (-)
G210030 NA non-coding upstream 29344 98044466 ~ 98048444 (-)
G210033 NA non-coding upstream 36368 98051490 ~ 98052134 (-)
G210042 NA non-coding upstream 66511 98081633 ~ 98082385 (-)
G210004 NA non-coding upstream 70856 98085978 ~ 98090437 (-)
G209841 NA other downstream 391564 97618859 ~ 97619212 (-)
G209802 NA other downstream 508382 97501172 ~ 97502394 (-)
G209560 NA other downstream 593588 97416821 ~ 97417188 (-)
G208658 NA other downstream 1588552 96421866 ~ 96422224 (-)
G208472 NA other downstream 1876304 96134077 ~ 96134472 (-)
LOC118943885 LOC106561728 other upstream 903326 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 927352 98936783 ~ 98944041 (-)
G210765 NA other upstream 1010610 99025732 ~ 99026118 (-)
G211127 NA other upstream 1108111 99123233 ~ 99123658 (-)

Expression


Co-expression Network