G210174



Basic Information


Item Value
gene id G210174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98271116 ~ 98273846 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU238110
CAATGAGCCTGGGGACGTAAGGCACACTGGGGACCAGGCCTACTATCATAAACACTGGGGACCAGGCCTACTATCATAAACACTGGGGACCAGGCCCACTATCaTAAACACGATGAGCCTGGGGACGTAAGGCACACTGgggaccagacctactatcataaacactggggaccagacctactatcataaacactggggaccagacctactatcataaacactggggaccaggcctactatcataaacactggggaccaggcctactatcataaacactggggaccagacctactatcataaacactggggaccagacctactatcataaacac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU238110 True 333 lncRNA 0.50 2 98271116 98273846

Neighbor


gene id symbol gene type direction distance location
LOC118936884 NA coding downstream 126105 98127948 ~ 98145517 (-)
LOC118943870 NA coding downstream 510316 97759882 ~ 97761086 (-)
LOC118944211 NA coding downstream 513453 97757564 ~ 97757663 (-)
LOC118944208 NA coding downstream 515389 97755630 ~ 97755727 (-)
LOC118943868 NA coding downstream 547933 97699305 ~ 97723186 (-)
LOC110500713 LOC106561713 coding upstream 39177 98313023 ~ 98352485 (-)
lmo2 rbtn2 coding upstream 150169 98424015 ~ 98426658 (-)
LOC110500720 LOC106561717 coding upstream 200888 98474734 ~ 98513861 (-)
edc3 LOC106561715 coding upstream 248152 98521998 ~ 98535690 (-)
LOC110500748 LOC106561725 coding upstream 314070 98587916 ~ 98601250 (-)
G210132 NA non-coding downstream 206 98269252 ~ 98270910 (-)
G210173 NA non-coding downstream 8389 98261255 ~ 98262727 (-)
G210172 NA non-coding downstream 12976 98257485 ~ 98258140 (-)
G210166 NA non-coding downstream 34522 98235324 ~ 98236594 (-)
G210153 NA non-coding downstream 68884 98201866 ~ 98202232 (-)
G210175 NA non-coding upstream 928 98274774 ~ 98274988 (-)
G210176 NA non-coding upstream 5345 98279191 ~ 98279540 (-)
G210188 NA non-coding upstream 22564 98296410 ~ 98296659 (-)
G210195 LOC106600457 non-coding upstream 27247 98301093 ~ 98301413 (-)
G210243 NA non-coding upstream 92592 98366438 ~ 98366675 (-)
G209841 NA other downstream 651904 97618859 ~ 97619212 (-)
G209802 NA other downstream 768722 97501172 ~ 97502394 (-)
G209560 NA other downstream 853928 97416821 ~ 97417188 (-)
G208658 NA other downstream 1848892 96421866 ~ 96422224 (-)
LOC118943885 LOC106561728 other upstream 644602 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other upstream 668628 98936783 ~ 98944041 (-)
G210765 NA other upstream 751886 99025732 ~ 99026118 (-)
G211127 NA other upstream 849387 99123233 ~ 99123658 (-)
LOC118936886 NA other upstream 1341830 99615676 ~ 99619142 (-)

Expression



Co-expression Network