XLOC_021595 (CR352232.1)


Basic Information

Item Value
gene id XLOC_021595
gene name CR352232.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 18129860 ~ 18132323 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042866
GATTGCTGTAAAACAGCAGACAAACAAAACGCACTTACCTCGAAGGTCTCGCCATTCTGCAGACAGACTGAAAGCCTTTTGCTTTTGCAAACTACAATTTTATTGGTAAAACTGGACTTTTGCAGCTGAAATCCAGGTGTCTCCCGCTGCTGGGAAGCTGTTTCTGTAGCACAGAGCTGTGCGAAACTACCTATGCAATGCAAACTGCACTAAACACGCGCAAATGAGTGCGATCTAGAGCATCTGCTCGCACGCAGCCTTGGTCTGTGTGGGTCGAAAATGGATAAATGTTCAAGTATCCACAGGCCGAATTGCCCTGGTCAAGCCTCCTGTAGAATAGTAGCTAACTAATTAGCTACTGCCTGGCCTGCAAGCCAGGATTCTTTTATGAGTAAAAGTGGGATGGGAGTCTGAAAAACGCAAGATGCCCGCAAACCAGGATTGGATGACCACACTCAGCAACAGCCGTTTACCTACTCATTCACACAGAAAGctCAACTCTCAGAAACAGAACCACAGAAAATATCAAAGACAGTGAAGGACACATCTCTGCTGTCATAAAAACGGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097278

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042866 True 568 lncRNA 0.46 2 18129860 18132323

Neighbor

gene id symbol gene type direction distance location
XLOC_021594 mfsd4ab coding upstream 14970 18103080 ~ 18114890 (+)
XLOC_021593 chia.6 coding upstream 136197 17980875 ~ 17993663 (+)
XLOC_021592 chia.6 coding upstream 181735 17939611 ~ 17948125 (+)
XLOC_021591 chia.4 coding upstream 196717 17926279 ~ 17933143 (+)
XLOC_021590 CU234171.1 coding upstream 222456 17899226 ~ 17907404 (+)
XLOC_021596 tafa4a coding downstream 1990 18134313 ~ 18145233 (+)
XLOC_021597 NA coding downstream 2143 18134466 ~ 18136294 (+)
XLOC_021598 CR339055.1 coding downstream 156751 18289074 ~ 18289201 (+)
XLOC_021599 avpr2ab coding downstream 394705 18527028 ~ 18543359 (+)
XLOC_021600 NA coding downstream 556031 18688354 ~ 18691482 (+)
XLOC_021588 CR381647.1 non-coding upstream 256262 17873526 ~ 17873598 (+)
XLOC_021584 dre-mir-124-5 non-coding upstream 346319 17783413 ~ 17783541 (+)
XLOC_021583 CR381647.3 non-coding upstream 346816 17782508 ~ 17783044 (+)
XLOC_021582 NA non-coding upstream 353515 17770424 ~ 17776345 (+)
XLOC_021581 CR407550.1 non-coding upstream 470758 17656836 ~ 17659102 (+)
XLOC_021602 CR847953.2 non-coding downstream 598999 18731322 ~ 18731399 (+)
XLOC_021604 NA non-coding downstream 792147 18924470 ~ 18929002 (+)

Expression


Co-expression Network