LOC110503689 (tm149)


Basic Information

Item Value
gene id LOC110503689
gene name tm149
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 14598789 ~ 14638314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110503689
ATGGGCCACAATTCTGAGAATTGCTCTGATGACTTGGATGCATTTTGGGATGAGTAAAACATGTGTGCCGTGTTGTACATTCACACGCGCACTTATTTTCGATCGGGGTACGAATTTAGTCCAAACTGTGGCAGGTATGACAATGGGGGAGCAGCGGAAAGACCGTATCGACTGTGTGCCGCCCAGAGCTTCAATAACCGGAGCTTCGTGAAATGCCAACCCTGTTTTCGCTGCCCTCCAAATCTTCAAAGGCTGTCCGAATGCAGCGCAACGACAGACACGCAATGCTGCGTAGCGAGGGACCAGACAGGCTGTTGGAAAGGTGCCCTGGATACCACAACTCAACAGGTCTAATGGTCAACAACATTAAGGTTCCAAGTGTCAACATCAAATCCCACCACAGCCAAACACATTGATCCAAGATTACATGGTGATTCTGCAACTTCACAGGTCAACCATCAGACTGCATGGATAGTGCTTACCCTCATCTTGGTTTTCTCTGTACTTGCATTTCTCTTATTCATCTATAttaagaagagaaggagaagatcaATAGCTTTTTGCTTCAGAGACAATATCCTGTATACCAACCAACATTCACAGAGCAATAAGACAACAGCAGCTGTCAATGAAGAGGTTGCTCTGCTACAGTCAGAGACCAGTAGCCTAGAGGACATTTTGAGTTCTGACCTCCAGTCTGCGCCACTGCAGACGGTTCTGGACAACCTGGATGTTCTAGAGGAGCTTGTGATCCTGCTGGACCCGGAGAGCCCTGGGGTGAAGAACACCAGCCACCTAGCATCTCGTTGCTCCTTCCCCGCCACCTGGATTACCTACACCTACTCCCTGAGGGAGAGCAAGAGCCCCCTGAGGGCCGTGCTGGAGGGGGTCACCACCAAACACCCAGAGTGGACTGTAGGACACCTGGCCAGGTTGCTGAGAGAGATGGACCGGAACGACACAGTGGTGGTGCTCACCAAGCTCAGCTTGCttaaggtcaaatcaaatcaaattGGTTCTCTGTAG
>TU259830
aaatacCTGCTTTAGAACAATGTCTTGTGTAAAGGCTGAAATGTAATACACAACTGTCCTCAAACATCAAGGTTCAAATAAGAGAAAGAAGTAACAAAGTAAACAAAAAGAGGAAACGAGGGGAGGAGGATTTCCCACTAGACCACCATTTATACAAAGCACAGCTAGTTTCACCAGTCCAAAATCTGAACAGAAACATGAATAAATACAACTATTCTAGAGCTCAAGCAATCTCTTATTGTAAAGATGTGAACAACAGGGTGTACATTTGATGTCCTAATATGTCTGACTGAACTGACTGACAGCGTTGTCTAAAGTTGTATGACAGCAAATGTTAAGGTGCTGAGTGCATTCTCTCCCTATCTTGGTTTTACACCAAGACATTATTATCTCTTAAAGCTATCCTACTgagcaacatacagtacagtactggcCTAATGCTATGCTTGAGATCTCCAGTGCACAGGGGAGCTGTCAGTCCACAGTCAGGTATATATAGAATTTATAACACATCTCTTAGTGGTGTAACATGGACAGTGTTCCACGCTTTGTGGATGGCAGAGAATGTCAGAAGGAGAAGTCAGTACTTTGTTAACTCCAGTGACTGTTGAGAAATATAGAGTCTGGATTTTGTTAATTCACTAAAGATGTGCAACTGTTGCAAAGAAGTAGGCCTAATATTATTGCAAAAGGTAATCAGCATTTGCCATGAtagtaataaaatatatttttaaataaaaaaagagcTACACTCATCACTCTTGGATTGGGTAGTGTTTGCTACATGCAAAAATGGTGAAGGGAAAGTTCTTAAAGATATGATTTAGCTGCAGCAAACTTTAAGGGTGACACTGTTATCTAACCGTTTAACTGAACATAATGGAGGTCTCTTCCCCGGTCTGTGTGACAGGGGAGTGGAGAATGGATAGAAAAATAGGTATTATTTGGTGGGTCTCTGACCTAGGAGCCACAAAGTCTATGGCACATCATATCTAGCACCATGGTTCTCTGAACAGTCAACGGAAAGCAAATATGTACAACCTGACGCATGATGAGCACTGTGAAATATAatttcaaataaataaaacaatgattAATAAATCAAGTAAAGATGGAGATATGGCTAAGGGATCAACTAGAGAGGATGGAGCCAACATGATTATGGGTGTCGAAATTAAAAATCTCCCCCTGCCCCCCCAACAAAAAAAGATGAGGAATCTCTCGAAGTCTAGCTTTTCTGGTCCACCCTTATTTCAACAGAAAGTGCTTGACGTTATGGCGTCAAGGAAAATACCTTCATGCAACATAGAACCAGCATGACCACAATATGCGTTCAGTATCCTGTTCTCAAGAAAAAACCACACGCTATAACGGTAGCTACTTCCGCTCTCTTCTGTGGCGAACTTGCCCAACCTCTGGCAGATGCATATTGGTTAGGAGCCAATGTGAGCTTATGGATGCATGTCCCTGTGTGGCGGTCCTCTTCCCTCTTGCTCCCCATCTCCTGGCCCTGgttcctctcccagtctcttcgTAGTGGCTCATCTTCCCCTGTATtttctcctcccccacctcccaaCCCAGTAAAACCTTAATTTAAGGCTTTTAACCTCTTCCTCTGTTGCCTCTGCTCTCACCCCGTTCCCTTGTGCCTTGTTTCCCCTGCAGAGACTGTGGCAGTACCAAGTCCTCCTCCTGCCCCTAGTTGAGGAAGCGTCTGCATTTCCGGGCCCCGCAGTTGCAGTTGAGCTTGCTTGCTGGGTCTTCGATGGGGAACTTGTAGTCGTAGGTGAGCTCCTCGCCCCGGTAGATCTTGCGCAAGGCGAAGATGACGATGTGCTTCTGGCCCTCCACGTTGATGACGCGCGAGTAGCAGTTGGGCTCGCACGAGTGGTTGATGAAGCGTGCCGCATTGCCGTGCATGGTGGCGTCCACCACGTCAAAGTCGTCGATACGGAACATGTAGCAGCCGATA
>TU259832
GCCATGAtagtaataaaatatatttttaaataaaaaaagagcTACACTCATCACTCTTGGATTGGGTAGTGTTTGCTACATGCAAAAATGGTGAAGGGAAAGTTCTTAAAGATATGATTTAGCTGCAGCAAACTTTAAGGGTGACACTGTTATCTAACCGTTTAACTGAACATAATGGAGGTCTCTTCCCCGGTCTGTGTGACAGGGGAGTGGAGAATGGATAGAAAAATAGGTATTATTTGGTGGGTCTCTGACCTAGGAGCCACAAAGTCTATGGCACATCATATCTAGCACCATGGTTCTCTGAACAGTCAACGGAAAGCAAATATGTACAACCTGACGCATGATGAGCACTGTGAAATATAatttcaaataaataaaacaatgattAATAAATCAAGTAAAGATGGAGATATGGCTAAGGGATCAACTAGAGAGGATGGAGCCAACATGATTATGGGTGTCGAAATTAAAAATCTCCCCCTGCCCCCCCAACAAAAAAAGATGAGGAATCTCTCGAAGTCTAGCTTTTCTGGTCCACCCTTATTTCAACAGAAAGTGCTTGACGTTATGGCGTCAAGGAAAATACCTTCATGCAACATAGAACCAGCATGACCACAATATGCGTTCAGTATCCTGTTCTCAAGAAAAAACCACACGCTATAACGGTAGCTACTTCCGCTCTCTTCTGTGGCGAACTTGCCCAACCTCTGGCAGATGCATATTGGTTAGGAGCCAATGTGAGCTTATGGATGCATGTCCCTGTGTGGCGGTCCTCTTCCCTCTTGCTCCCCATCTCCTGGCCCTGgttcctctcccagtctcttcgTAGTGGCTCATCTTCCCCTGTATtttctcctcccccacctcccaaCCCAGTAAAACCTTAATTTAAGGCTTTTAACCTCTTCCTCTGTTGCCTCTGCTCTCACCCCGTTCCCTTGTGCCTTGTTTCCCCTGCAGAGACTGTGGCAGTACCAAGTCCTCCTCCTGCCCCTAGTTGAGGAAGCGTCTGCATTTCCGGGCCCCGCAGTTGCAGTTGAGCTTGCTTGCTGGGTCTTCGATGGGGAACTTGTAGTCGTAGGTGAGCTCCTCGCCCCGGTAGATCTTGCGCAAGGCGAAGATGACGATGTGCTTCTGGCCCTCCACGTTGATGACGCGCGAGTAGCAGTTGGGCTCGCACGAGTGGTTGATGAAGCGTGCCGCATTGCCGTGCATGGTGGCGTCCACCACGTCAAAGTCGTCGATACGGAACATGTAGCAGCCGATA
>TU259834
gggggccgaatactttcgcaatgcactgtatcttCGATAACATGGCACTTAAAGCAAGGATGGTAAACCCGGTGTCCAGGCCAAGTTTCCAACCGTGGCCAACTAATCATCTTATGTCAAATGTATTATCACCAACCAATGATATTGCTTTATTTATACATTGCATGTTATATAAATGACATATCAGCATTTATTTGTTTAATTCTCTTTTCGAATGACCAAGTCTTATTTTAGGCATataacataaaataaaaaaagtgcaTAGAAAAATTTAACGGGTTTAGAAATATGTATACAATTATTTACAAACTCAAGGTAACAAAGACAAGTTCACACATTTTCTTGTTTTGTCTTTTATACTTTAGTTATACTTAACCCTTACATATAGAACATACAGCTTTCTGAACCATTTCTGGGAGAGATCGTCATGGTAACTTCATGTTTACAACTAGTGCTTTGTATGCTTCATCGAACACACAGGCCAGCTCTGCAGGACATTAAAACCACGTTACTCTTATTATATTGTCATCATCCTCTTTTTTGCATTAGTATTCTTTAACATCTGTCAGAACAACTGAGGTAGAATCCTGGCAAGAGGTTAGGGAGTGGAGTGGGCATAGAGAAACCTGCTCTGAGCGGTGTTACAACATCAGGTTTTCAGCGAAAAAGGAAGCTAGGTTAAGGATAGCCGTATCCCTGAAAAAGATGCATCCTGTTATTGGCAAACTCTGCTAAGGGTGTAGATGATTGACAAATGGGAATACAGGCTCCATCTCACTGATTGGTCGCACAGGCTGGTGGGTTTAAGCTCTTCCTTACTGGGTATTATATTTCAAAAGGACAGTGCTCATTTCCTTTAGAATATTATCTGTACCTTGAAGGGTTCTCTGTAGCACGCAGATGGGAAGAACAGCATGACTCGAATGCTTGATATTCTCCTGTTATATGGCCTGCCGATACTAAGGCCTGCTGTACTTTCTCCATGAAAATTCTACCAGAACAAAGAAATACAAtcaaaaacaattaaaaaatacCTGCTTTAGAACAATGTCTTGTGTAAAGGCTGAAATGTAATACACAACTGTCCTCAAACATCAAGGTTCAAATAAGAGAAAGAAGAAGTAACAAAGTAAACAAAAAGAGGAAACGAGGGGAGGAGGATTTCCCACTAGACCACCATTTATACAAAGCACAGCTAGTTTCACCAGTCCAAAATCTGAACAGAAACATGAATAAATACAACTATTCTAGAGCTCAAGCAATCTCTTATTGTAAAGATGTGAACAACAGGGTGTACATTTGATGTCCTAATATGTCTGACTGAACTGACTGACAGCGTTGTCTAAAGTTGTATGACAGCAAATGTTAAGGTGCTGAGTGCATTCTCTCCCTATCTTGGTTTTACACCAAGACATTATTATCTCTTAAAGCTATCCTACTgagcaacatacagtacagtactggcCTAATGCTATGCTTGAGATCTCCAGTGCACAGGGGAGCTGTCAGTCCACAGTCAGGTATATATAGAATTTATAACACATCTCTTAGTGGTGTAACATGGACAGTGTTCCACGCTTTGTGGATGGCAGAGAATGTCAGAAGGAGAAGTCAGTACTTTGTTAACTCCAGTGACTGTTGAGAAATATAGAGTCTGGATTTTGTTAATTCACTAAAGATGTGCAACTGTTGCAAAGAAGTAGGCCTAATATTATTGCAAAAGGTAATCAGCATTTGCCATGAtagtaataaaatatatttttaaataaaaaaagagcTACACTCATCACTCTTGGATTGGGTAGTGTTTGCTACATGCAAAAATGGTGAAGGGAAAGTTCTTAAAGATATGATTTAGCTGCAGCAAACTTTAAGGGTGACACTGTTATCTAACCGTTTAACTGAACATAATGGAGGTCTCTTCCCCGGTCTGTGTGACAGGGGAGTGGAGAATGGATAGAAAAATAGGTATTATTTGGTGGGTCTCTGACCTAGGAGCCACAAAGTCTATGGCACATCATATCTAGCACCATGGTTCTCTGAACAGTCAACGGAAAGCAAATATGTACAACCTGACGCATGATGAGCACTGTGAAATATAatttcaaataaataaaacaatgattAATAAATCAAGTAAAGATGGAGATATGGCTAAGGGATCAACTAGAGAGGATGGAGCCAACATGATTATGGGTGTCGAAATTAAAAATCTCCCCCTGCCCCCCCAACAAAAAAAGATGAGGAATCTCTCGAAGTCTAGCTTTTCTGGTCCACCCTTATTTCAACAGAAAGTGCTTGACGTTATGGCGTCAAGGAAAATACCTTCATGCAACATAGAACCAGCATGACCACAATATGCGTTCAGTATCCTGTTCTCAAGAAAAAACCACACGCTATAACGGTAGCTACTTCCGCTCTCTTCTGTGGCGAACTTGCCCAACCTCTGGCAGATGCATATTGGTTAGGAGCCAATGTGAGCTTATGGATGCATGTCCCTGTGTGGCGGTCCTCTTCCCTCTTGCTCCCCATCTCCTGGCCCTGgttcctctcccagtctcttcgTAGTGGCTCATCTTCCCCTGTATtttctcctcccccacctcccaaCCCAGTAAAACCTTAATTTAAGGCTTTTAACCTCTTCCTCTGTTGCCTCTGCTCTCACCCCGTTCCCTTGTGCCTTGTTTCCCCTGCAGAGACTGTGGCAGTACCAAGTCCTCCTCCTGCCCCTAGTTGAGGAAGCGTCTGCATTTCCGGGCCCCGCAGTTGCAGTTGAGCTTGCTTGCTGGGTCTTCGATGGGGAACTTGTAGTCGTAGGTGAGCTCCTCGCCCCGGTAGATCTTGCGCAAGGCGAAGATGACGATGTGCTTCTGGCCCTCCACGTTGATGACGCGCGAGTAGCAGTTGGGCTCGCACGAGTGGTTGATGAAGCGTGCCGCATTGCCGTGCATGGTGGCGTCCACCACGTCAAAGTCGTCGATACGGAACATGTAGCAGCCGATA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2B-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110503689 False 1026 mRNA 0.50 8 14600902 14607768
TU259830 False 1975 lncRNA 0.44 2 14598789 14637418
TU259832 False 1270 TUCP 0.38 2 14598789 14636710
TU259834 True 3006 lncRNA 0.48 2 14598789 14638314

Neighbor

gene id symbol gene type direction distance location
psenen LOC106577931 coding downstream 76000 14519197 ~ 14524902 (-)
antol lin37 coding downstream 89270 14508406 ~ 14511632 (-)
LOC110510742 LOC106578317 coding downstream 119247 14475682 ~ 14481655 (-)
LOC110510581 LOC106578340 coding downstream 203619 14389198 ~ 14397283 (-)
si:dkey-79d12.4 LOC106605603 coding downstream 321760 14270653 ~ 14279142 (-)
LOC110510719 LOC106577908 coding upstream 32001 14639769 ~ 14642909 (-)
zbtb32 LOC106577891 coding upstream 48096 14655864 ~ 14667500 (-)
aplp1 LOC106577862 coding upstream 86838 14694606 ~ 14742899 (-)
LOC110510856 LOC106577793 coding upstream 172299 14780067 ~ 14834031 (-)
si:dkey-262k9.2 LOC106577773 coding upstream 415757 15023525 ~ 15040893 (-)
G227094 NA non-coding downstream 102048 14496793 ~ 14498854 (-)
G227068 NA non-coding downstream 171457 14424463 ~ 14429445 (-)
G227065 LOC106577515 non-coding downstream 184024 14415060 ~ 14416878 (-)
G227015 NA non-coding downstream 190822 14409102 ~ 14410080 (-)
G227064 NA non-coding downstream 194752 14405901 ~ 14406150 (-)
G227162 LOC106577926 non-coding upstream 11171 14618939 ~ 14623213 (-)
G227163 NA non-coding upstream 12500 14620268 ~ 14625116 (-)
G227207 NA non-coding upstream 106505 14714273 ~ 14714833 (-)
G227331 NA non-coding upstream 286481 14894249 ~ 14894545 (-)
G227340 NA non-coding upstream 292066 14899834 ~ 14900139 (-)
G227060 NA other downstream 125736 14428793 ~ 14475166 (-)
LOC110538195 LOC106578103 other downstream 599094 13995196 ~ 14023153 (-)
wu:fe05a04 LOC106578221 other downstream 673069 13909746 ~ 13927861 (-)
G226294 LOC100136012 other downstream 1256527 13344074 ~ 13344375 (-)
LOC110512327 LOC106578554 other upstream 928597 15536363 ~ 15539677 (-)
G228094 NA other upstream 993247 15601015 ~ 15601488 (-)
G228098 fbrl other upstream 1098466 15706234 ~ 15708265 (-)
G228191 LOC106578455 other upstream 1179854 15762029 ~ 15791401 (-)
G229373 LOC100194703 other upstream 2231621 16839389 ~ 16839839 (-)
G227472 LOC106605624 non-coding upstream 352149 14990463 ~ 14991406 (-)
G227476 NA non-coding upstream 358903 14997217 ~ 14998401 (-)

Expression


Co-expression Network