XLOC_021609 (si:dkey-93l1.4)


Basic Information

Item Value
gene id XLOC_021609
gene name si:dkey-93l1.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 19182819 ~ 19187816 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042891
GAACTTATATCATAACACGATCAACGAACTTCACCGATCAAAGCGCCATCTTGGATCCTCCCGCGGCCTGCGCCCCCCTCCCTCTCCCCCACCACCGATGACGAATAAAAAGAACGAATTCGATTGCCGTTACGTCACTGGTCAGAATTCAGAATTTACTCAGAGTGACAAACGAACGAGTACAGTGAACATTGATTTAACGACTTTAGCGACTTGTTTTGCATCTCAAATGGCAAATAACACGTCAGCTGCGTTTTTTAATCGAGTTAATACGATCACGACTGAGTTTGTCAACGAAAATCATCAAAGTGACACGATGGCTTCTCCTTCACCTTCTACCGTGATGAGAAGCCCAACAGaAAACACAGAGAAAAGGAGGAAAGGGAATAAAGCCTCTGCTTTCTTTAAGAGAGCATGGAAGGCTGTGAAGCGCCCTTTCCTTTGCTGTGACCGGAACAGAGTGGTTCCCTTTGAACCACGGTCAGATGTCGATGATTGCGAGCACCTGCCTGTTCCAGGTCCCTCCAGGACCGTCGCAGCACATGCAGACCTTGAGCCGGTGTGGCAGCCAGGCCAGGTCTGTGAAGATCTTCAGCCgttgagtgttccgggcccctTCAGCATCAAGCAAACAGCAGATGTGCCGAATGCAGATCCGGCCCGTCCAGAGTCCTCGATGGCCCTCACAGGTCATGTTGATACTGAGCTGGTGTTTCTGCCAGGCCAGGTCTGGGAAGATCCTCAGCCAATCAGTGTCCATGACCTCTCCAATATTAAGAACATGACGGATGCTGATTCGGCCTGTCCTGAGTCGCCTTCGTCTGTTCAAGACCCCTCTGATATTGATGGGACTGATGaaaaacccaagaaaggaaggaaaggcaAAAGAGTCTCTGCTTTCTTCAAGAGAGTATGGAAGGCTGCAACGCGCCCTTTCCTGTGCTGTGACACAGATGTAGTCCAGCATCTTACACCACAACCTGAGCCTGAGCCTGAGCCTGAACCTGAACCTGAGCCTGAGGTGGGTCTTTTTGAAGTGAAAGaactgattggagaaggaagttTTGGCAAGGTGTATCTGGGATCTCACGTATTTAATGAGAGAACAAAGGTTGCCCTGAAGTACATCAAGAAGCGTGAACAGGACCGTTATCTCGACGTTGATGGCCATTCCAAACCTGTGCTTGCAGAAGTGGCAATCATGCTTAAGTTGATGAAGGACCCACCTTGTCCCAGCATCATCACATTACACCACTGGATTAAGAATAAGAACGACTTCGTTCTCTTTCTGGAGTACGCCGAGTCATCCCAGAACTTGGCTTATTATCTCAGAAGTTCATTGGACATTGATGAAAACCACGCACGCCGGTTAATGCATCAGTTGATCCAAGCTGTCAAGTTCTGCGCTGAGCGTGGAGTTTTCCATGGAGATATCCACTCGGGGAACATCCTGGTGACTCAACCCCAATCAGAGCTCAAACTGATTGACTTTGGTTGTGCTCGGCTAATCACCAGCGAGCCTTTCAACAGCAGTGATTATCGAGGAGCCTTACTTTACACGCCGCCTGAGGTTCTGAGGGATCCCACATTCTTTCCTAACCCGGCATACGTCTGGACATTAGGCCTCATCCTGTATGAAATATTACATACACGATTGGCCTTTTACGACACGCATTCGATAATCATTGGAGACCTCCAGACAGACCTCACCTTATCTTTAGATTGCCTGGACCTGATTTCCCAATGTTTGGTCCGCAATCCAGAGAAGCGACTGCAGTTACATCAGTTAGAAGAGCACCGGTGGTTCAATCCAACGAGCCCAAATCCTGTGCAGCAGTGAGACAAGAGGAGGTAGaaaacaCTAAAGAAGCGAAGAGGAGAACAGCAGCATTTCCAGaaatttcacaagactgttaaagttattaattactccctcatgtcattccaaacccctcaGACCTTACTTTTCAGTGTCAGTGTGTTGATGAGAGCTTTGtcctgcactgtatgtgtgtccACTGCTGATGTTTACCTcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggtta

Function

symbol description
si:dkey-93l1.4 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094927

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042891 True 2089 mRNA 0.48 9 19182819 19187816

Neighbor

gene id symbol gene type direction distance location
XLOC_021608 CR388168.2 coding upstream 431 19177891 ~ 19182388 (+)
XLOC_021607 NA coding upstream 63376 19105546 ~ 19119443 (+)
XLOC_021606 CR788311.1 coding upstream 115832 19051485 ~ 19066987 (+)
XLOC_021605 cox4i2 coding upstream 231671 18944388 ~ 18951148 (+)
XLOC_021604 NA coding upstream 253817 18924470 ~ 18929002 (+)
XLOC_021610 ccdc115 coding downstream 10428 19198244 ~ 19201328 (+)
XLOC_021611 si:dkey-109j17.5 coding downstream 14820 19202636 ~ 19206419 (+)
XLOC_021612 apobec2b coding downstream 25656 19213472 ~ 19221027 (+)
XLOC_021613 CR388168.1 coding downstream 29712 19217528 ~ 19218940 (+)
XLOC_021614 NA coding downstream 285580 19473396 ~ 19476151 (+)
XLOC_021602 CR847953.2 non-coding upstream 451420 18731322 ~ 18731399 (+)
XLOC_021627 AL953864.1 non-coding downstream 999809 20187625 ~ 20187739 (+)
XLOC_021628 NA non-coding downstream 1157494 20345310 ~ 20361426 (+)
XLOC_021632 CR352228.2 non-coding downstream 1283939 20471755 ~ 20471870 (+)

Expression


Co-expression Network