LOC110520472 (LOC106586659)


Basic Information

Item Value
gene id LOC110520472
gene name LOC106586659
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68846508 ~ 68850315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597815.2
TCGTTTTATTGGAAGATGGAAATTAATGTGGAACCTCTTTCTTTTTTTGCCACGTTCTACACGGAATTTCTAAAAGTGACACGGAAGGGAAAAAAATGGTGTCACTAgtcaccacagccacaaagttataTACCCCGTTTATGATTTCAGACCTAACCCTAAACTCAACCCTTACCTTAactacactgctaaccttatgtctaaccgtaaccttaaagcacatttttgttttcagaaTTTTTTGACCGTACACTTTGTGGCTGTGATAACTAATGAAAACAAACCAAAAAATACTCACAGGAAGTCGATAGCTAACTACGTTAGCTTTTCCGCTGGGTTTATTCTGTCAAGCTGCTCATATCTGAAAATACATTTTGTGTGAGCTTCTGGACCAAATGACAGCGACTCCGTTGACTGCAATTGTTTTATCTCGCTGCATGCAGTTAAATCGCTAAATGATGGGAGAGAGAATGTGTATAATGGTGGTGTgatcctgtgtgtctctgtgccatGGAGAAGCCGTGGAGGCTTTGGGGCTCGGTGGAGCGCTGTGCCCTGGCCTTGGCCTCCTGGTCCTGGGGTGCCTGTCGCATCTCCCTCCTAGCCCTCATCCTCACCTTCCACCTCTACGGAGGCTTCTTTCTCCTGGCTCTCATCCTGGCCTCGGTGGCCGCCATCCTCTACAAGTTCCAGGACGTGCTGCTCTACTTCCCCGACCAGCCCTCCTCCTCCCGGCTCTATGTGGCCATGCCAACAGGCATCCCCCATGAGAACGTCTACATCCGCACCAAGGACGGCGTGCGCCTCAACCTTATCCTGCTCCGCTACACCGGCGGAGACAGCCTTGATAACCCCGGGGTCGCCCCCGTCAACGCATCTAACCCTGCCTCCACGGCCCCGCCCACGATCCTTTATTTCCACGGCAACGCAGGCAACATCGGGCACCGGGTGCCCAACGCTCTGCTGATGCTGGTGAACCTGAAGGCCAACGTGGTGCTGGTGGACTACCGGGGGTATGGGAAGAGCGAGGGCGAGCCCAGTGAGGACGGCCTGTACCTGGACGCCCAGGCCACGCTGGACTACGTGATGACCCGGCCTGACCTGGACAAGACCAAGGTGATGGTGTTTGGCCGCTCTCTGGGGGGTGCAGTGGCGGTTCGCCTGGCCTCGGCCAACCCTCACCGTGTGGCGGCCATCGTGGTGGAGAACACCTTCCTCAGCATCCCCCACATGGCCGCCACACTCTTCTCCTTCCTGCCCATGAGGCTGCTGCCCCTGTGGTTCTACCGGAACCAGTTCCTGTCCTACAGACAGGTGGCGCTGTGCCGGATGCCCTCGCTGTTCGTGTCGGGCCTGTCAGACCAGCTCATCCCGCCCGTCATGATGAAGCAACTTTACGAGCTGTCGCCGGCACGGACTAAACGTCTGGCCATCTTCTCTGAGGGCACACACAACGACACATGGCAGTGCCAGGGCTACTTCGCCGCACTGGAACAGTTTGTCAAGGACCTGATGAATAGCCACACCCGCGAGGAGAGCGTCCAGTCCACAGCCAGTGTCACAATCATCTAGTCTAGAGAGAAGAAGAGTCTAGAGAAAACCCTACAGTCCATACTCCCTACGTATGTGTGTAGATCCAAAACCATTGAATAGGTGTAATAAGCAGCAATATGGCTAAGGAAATGTGAAGCCAACCACTGCCATATTGGTTATACCTGTCTAGTTGTTTCTGATCTACTTGAAGTGTCTATGGTAGGGTAGCAGTAACTAGGCTGAGCTACTAGGGTCAGGTTGGAGAGAATGTTCATTTCTacacttttgttttgttttcatcaTGGTCTTTTTCCATAGTAACTGTACCATATCAAACAATTGGGGAGTACTTTAGGTATGGGGGGTGTTTGGGGTTGATGGAGGGGTGATTAACATGGACATGTCTTCATAAGTCTATTTGTGTGTGATGAATGACTGCAGTGGGTGGACATGTACTTGTTATGGCCTTTTTTGAATAATTTACAAACCATACACAACTTTGATCATCCTGTCAAACACAACCACACTtttaaaaacactttaaaaagAAAATCAACTACAGGAGGCAAAGCTGCACCTGAACTGCCAGAACTCCATGACAATGTTTAGCTAACATAATAGCATTTCAGTAAATCAATAAGACATTTTTGACTAATATGATAGTGTTTCAGTAATTCAATTAAAAAGTTTATTTTAATTGTGTAATTTGTTATTTCATGACATGCTGTTTAAAGTTACATGCGTGAGGATTTTATAGGCATCATAGCGTCCTTATAGATTCATATTCTACTTTTGACAGAAAATCCTGTTCATATCAGCCGAGAGAGACACAATATGATACAGCCCATAAGGCACTATGTATGTGGCACTCTGAAAAGGAGCATGCACAACCTGAATGTTTCACTCCCAAActattttgttgttgtaaatggCCAGATGATATTCCAATGTTGCATAAATCCCATTCTACACTGTATATTCTCTGACAATAAATGTAAACGCCTATGTGGCTGGAGCTGTTGTCAACTCTTTGCATAGTTGACCCGTTATCTTGGTTGCCAACACCAGGGCTTTCAGACGGATGTGACCATTAGATTTGACATGTAAGGCTTGTCTGTCTGTACAATACATTTTTATCTGCATTGTTCTGAATTCTGCACACTATTAAAAACCAGAACACCCTCACCC

Function

NR:

description
protein ABHD13-like

GO: NA

KEGG:

id description
K24083 ABHD13; abhydrolase domain-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597815.2 True 2721 mRNA 0.48 2 68846508 68850315

Neighbor

gene id symbol gene type direction distance location
LOC110504539 LOC106586655 coding upstream 481026 68324426 ~ 68365482 (+)
LOC118964318 NA coding upstream 509193 68334244 ~ 68337315 (+)
si:ch73-390b10.2 gpr89 coding upstream 568093 68261414 ~ 68278415 (+)
LOC110520465 btla coding upstream 625092 68216285 ~ 68221416 (+)
si:ch211-214p13.9 cd200r1 coding upstream 668735 68173648 ~ 68177773 (+)
LOC110504548 NA coding downstream 4457 68854772 ~ 68858737 (+)
LOC110504559 LOC106586663 coding downstream 92220 68942535 ~ 69172271 (+)
LOC110520475 LOC106586671 coding downstream 619461 69469776 ~ 69595798 (+)
LOC110520478 LOC106586673 coding downstream 775440 69625755 ~ 69635303 (+)
LOC110520479 LOC106586674 coding downstream 784265 69634580 ~ 69640723 (+)
G290678 NA non-coding upstream 27884 68818408 ~ 68818624 (+)
G290675 NA non-coding upstream 29458 68816714 ~ 68817050 (+)
G290666 NA non-coding upstream 30837 68815370 ~ 68815671 (+)
G290669 NA non-coding upstream 35173 68811015 ~ 68811335 (+)
G290398 NA non-coding upstream 113598 68715423 ~ 68732910 (+)
G290710 NA non-coding downstream 895 68851210 ~ 68853336 (+)
G290711 NA non-coding downstream 3354 68853669 ~ 68854375 (+)
G290782 NA non-coding downstream 130281 68980596 ~ 68984335 (+)
G289883 NA other upstream 621202 68223725 ~ 68225306 (+)
G289517 NA other upstream 1084085 67761737 ~ 67762423 (+)
G289486 NA other upstream 1164386 67678862 ~ 67682122 (+)
G289455 NA other upstream 1214298 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 1326538 67519326 ~ 67520162 (+)
G291327 NA other downstream 845080 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1011745 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1068867 69915810 ~ 69923807 (+)
G291461 NA other downstream 1099352 69949667 ~ 69952168 (+)

Expression


Co-expression Network