G289883


Basic Information

Item Value
gene id G289883
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68223725 ~ 68225306 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328723
ATGACGGTAATACTTTGCGTAACTGTGATGTTATGTTGGTGTGGTGTGATTGTTATCAAGCAGAACATACAGTGACACATTTTAGTCTCAGTTATTGTTGGGTTGGAAACATGTTACAGTAGTTTGAAACAATTTAAAATTAAGGTTACATGATCACTATGCAGCTCAACTcaattacaatacattcaccAGAGACTAGTGATGTCCCTCATTGTGTTGTAAATTGTGACAGAGTCATAGAGTATTACCATATGAAGAAGGAATGGCTGGTTTTTGAGAGTGCAGAATGAAGCTTTGGTCTTGTCTCACTGGTAATGCCTTTGGTCCCTACACTGCTTCTGTATGTGTTCTGGTAAAatcctgagtgagtgagtggttaCTGTAAAGTACTGGGGTTTTCTTTGTGCACCAGATACAGACCCTGTCCTGCACAAGGCTGTGTGCTTGTGGTTTAAAAACACAGTGCACAGGAAGTGCTAGGAGCAGCCCACCACACCAAGACAGCGAGAAACTCTATGCTCTTAGAGATGACATTTATTCAGAGAAAACTCTATGCTCAAATAGATTGTTTATTCAGAGGGAAACTCTATGCTCAGAGAGATTATGTTTATTCAGAGAGATACTCTATGCTCAGAGAGATTATGTTTATTCAGAGAGATACTCTATGCTCAGAGAGATTATGTTTATTCAGAGAGAAATTATGCTCAGAGAGATAATGTTTATTCAGAGGGAAATTATGCTCAGAGAGATAATGTTTATTCAGAGAGAAATTATGCTCAGAGAGATAATGTTTATTCAGAGATAAACTCTATGCTCAGAGAGATGACATTTATTCAGAGAAAACTCTATGCTCAAATAGATTGTTTATTCAGACAGAAACTCTATGCTCAAATAGATTGTTTATTCAGAGGGAAACTCTATGCTCAGAGAGATTATGTTTATTCAGAGATAAACTCTATGCTCAGAGAGATTCTGTTTATTCAGAGAGAAACTCTATGCTCAGAGAGATTgtgtttattcagagagaaaTTATGCTCAGAGAGATAATGTTTATTCAGAGGGAAATTATGCTCAGAGAGATAATGTTTATTCAGAGAGAAACTATGCTCAGAGAGATTATGTTTATTCAGAGAGAAACTCTATGCTCAGAGAGATTgtgtttattcagagagaaaCTATGCTCAGAGAGATTATGTTTATTCAGAGAGAAACTCTATGCTCAGAGATGATGCACTATTGAAATTATCCTGGCAGTGTCGAACCAATGCAAGTTGTCTTGTTTTCTGATTTGACTTATAAAACTTATTGAGACACAAAATATACAAACTCTTCAGCCTAATTATGCCATTACATTATTGTCATAATTGCTGACACATCCATTAGCCTAACAATCTCAGAAGAGGTCCCATTCTTATCAGTGTAATGGATTTGTATTAGTCTATAAGATAGTCATTTTCAGCCATAAATAAGTAACCTAGGTGTTTTTTGAGAGCAAACCACTGACTGTACCTTGATGCTGTGTTACTTTCAGCTACTGCCCGCCCCC
>TU328724
ATGACGGTAATACTTTGCGTAACTGTGATGTTATGTTGGTGTGGTGTGATTGTTATCAAGCAGAACATACAGTGACACATTTTAGTCTCAGTTATTGTTGGGTTGGAAACATGTTACAGTAGTTTGAAACAATTTAAAATTAAGGTTACATGATCACTATGCAGCTCAACTcaattacaatacattcaccAGAGACTAGTGATGTCCCTCATTGTGTTGTAAATTGTGACAGAGTCATAGAGTATTACCATATGAAGAAGGAATGGCTGGTTTTTGAGAGTGCAGAATGAAGCTTTGGTCTTGTCTCACTGGTAATGCCTTTGGTCCCTACACTGCTTCTGTATGTGTTCTGGTAAAatcctgagtgagtgagtggttaCTGTAAAGTACTGGGGTTTTCTTTGTGCACCAGATACAGACCCTGTCCTGCACAAGGCTGTGTGCTTGTGGTTTAAAAACACAGTGCACAGGAAGTGCTAGGAGCAGCCCACCACACCAAGACAGCGAGAAACTCTATGCTCTTAGAGATGACATTTATTCAGAGAAAACTCTATGCTCAAATAGATTGTTTATTCAGAGGGAAACTCTATGCTCAGAGAGATTATGTTTATTCAGAGATAAACTCTATGCTCAGAGAGATTCTGTTTATTCAGAGAGAAACTCTATGCTCAGAGAGATTgtgtttattcagagagaaaTTATGCTCAGAGAGATAATGTTTATTCAGAGGGAAATTATGCTCAGAGAGATAATGTTTATTCAGAGAGAAACTATGCTCAGAGAGATTATGTTTATTCAGAGAGAAACTCTATGCTCAGAGAGATTgtgtttattcagagagaaaCTATGCTCAGAGAGATTATGTTTATTCAGAGAGAAACTCTATGCTCAGAGATGATGCACTATTGAAATTATCCTGGCAGTGTCGAACCAATGCAAGTTGTCTTGTTTTCTGATTTGACTTATAAAACTTATTGAGACACAAAATATACAAACTCTTCAGCCTAATTATGCCATTACATTATTGTCATAATTGCTGACACATCCATTAGCCTAACAATCTCAGAAGAGGTCCCATTCTTATCAGTGTAATGGATTTGTATTAGTCTATAAGATAGTCATTTTCAGCCATAAATAAGTAACCTAGGTGTTTTTTGAGAGCAAACCACTGACTGTACCTTGATGCTGTGTTACTTTCAGCTACTGCCCGCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328723 False 1546 TUCP 0.37 2 68223725 68225306
TU328724 True 1215 lncRNA 0.38 2 68223725 68225306

Neighbor

gene id symbol gene type direction distance location
LOC110520465 btla coding upstream 2309 68216285 ~ 68221416 (+)
si:ch211-214p13.9 cd200r1 coding upstream 45952 68173648 ~ 68177773 (+)
LOC110504531 LOC106586650 coding upstream 109048 68058115 ~ 68114677 (+)
LOC110520463 LOC106586649 coding upstream 185769 68002305 ~ 68037956 (+)
lrrc58b LOC106586648 coding upstream 233784 67982331 ~ 67989941 (+)
si:ch73-390b10.2 gpr89 coding downstream 36108 68261414 ~ 68278415 (+)
LOC110504539 LOC106586655 coding downstream 99120 68324426 ~ 68365482 (+)
LOC118964318 NA coding downstream 108938 68334244 ~ 68337315 (+)
LOC110520472 LOC106586659 coding downstream 621202 68846508 ~ 68850315 (+)
LOC110504548 NA coding downstream 629466 68854772 ~ 68858737 (+)
G289933 NA non-coding upstream 22816 68200681 ~ 68200909 (+)
G289881 NA non-coding upstream 40529 68180062 ~ 68183196 (+)
G289840 NA non-coding upstream 166445 68057057 ~ 68057280 (+)
G289828 NA non-coding upstream 181826 68041129 ~ 68041899 (+)
G289645 NA non-coding upstream 190494 68032864 ~ 68033231 (+)
G290078 NA non-coding downstream 31155 68256461 ~ 68256755 (+)
G290082 NA non-coding downstream 33124 68258430 ~ 68258666 (+)
G290094 NA non-coding downstream 65365 68290671 ~ 68293010 (+)
G290126 NA non-coding downstream 130933 68356239 ~ 68361416 (+)
G290110 NA non-coding downstream 146637 68371943 ~ 68372280 (+)
G289517 NA other upstream 461302 67761737 ~ 67762423 (+)
G289486 NA other upstream 541603 67678862 ~ 67682122 (+)
G289455 NA other upstream 591515 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 703755 67519326 ~ 67520162 (+)
G289116 NA other upstream 744796 67474973 ~ 67478929 (+)
LOC110520478 LOC106586673 other downstream 1401037 69625755 ~ 69635303 (+)
G291327 NA other downstream 1470089 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1636754 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1693876 69915810 ~ 69923807 (+)
G291461 NA other downstream 1724361 69949667 ~ 69952168 (+)

Expression


Co-expression Network