G289645


Basic Information

Item Value
gene id G289645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68032864 ~ 68033231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328425
GTTAAACAGTACATGGGGCAAGTGAATTAGCCTATCTTAGAATAAATGCAGGCAGTAGTAGCCAGCCATGTATTAGGCAGTAGTAGCCAGCCATGTATTAGGCATGTTTTTTTGCCTATTTTGTTTATAATTGAATAGGACTAAGTAAGAAAATCGTGCATTTTCATCTGTCGGGGTCGTATAAcaatgtgtgtgaatgagtgaagGAACATAACAAAGCACTCTGAGTGATAGCACAGTAATGAAGGAACATAACAATGTACTCTGAGTGATAGCACAGTAATGAAGGAACATAACAATGTACTCTGAGTGATAGCACAGTAATGAAGGAACATAACAATGTACTCTGAGTGATAGCACAGTAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328425 True 368 lncRNA 0.38 1 68032864 68033231

Neighbor

gene id symbol gene type direction distance location
lrrc58b LOC106586648 coding upstream 42923 67982331 ~ 67989941 (+)
LOC110520461 LOC100136473 coding upstream 51908 67944878 ~ 67980956 (+)
LOC110520459 LOC106586086 coding upstream 145525 67881416 ~ 67887339 (+)
LOC118936465 LOC106586642 coding upstream 298818 67726893 ~ 67734046 (+)
LOC110504522 LOC106586570 coding upstream 429632 67599901 ~ 67603232 (+)
LOC110504531 LOC106586650 coding downstream 24884 68058115 ~ 68114677 (+)
si:ch211-214p13.9 cd200r1 coding downstream 140417 68173648 ~ 68177773 (+)
LOC110520465 btla coding downstream 183054 68216285 ~ 68221416 (+)
si:ch73-390b10.2 gpr89 coding downstream 228183 68261414 ~ 68278415 (+)
LOC110504539 LOC106586655 coding downstream 291195 68324426 ~ 68365482 (+)
G289619 NA non-coding upstream 33486 67999099 ~ 67999378 (+)
G289586 NA non-coding upstream 90684 67941945 ~ 67942180 (+)
G289585 NA non-coding upstream 91881 67940782 ~ 67940983 (+)
G289578 NA non-coding upstream 104929 67927679 ~ 67927935 (+)
G289574 NA non-coding upstream 108271 67924329 ~ 67924593 (+)
G289828 NA non-coding downstream 7898 68041129 ~ 68041899 (+)
G289840 NA non-coding downstream 23826 68057057 ~ 68057280 (+)
G289881 NA non-coding downstream 146831 68180062 ~ 68183196 (+)
G289933 NA non-coding downstream 167450 68200681 ~ 68200909 (+)
G289883 NA non-coding downstream 190494 68223725 ~ 68225306 (+)
G289517 NA other upstream 270441 67761737 ~ 67762423 (+)
G289486 NA other upstream 350742 67678862 ~ 67682122 (+)
G289455 NA other upstream 400654 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 512894 67519326 ~ 67520162 (+)
G289116 NA other upstream 553935 67474973 ~ 67478929 (+)
LOC110520478 LOC106586673 other downstream 1593112 69625755 ~ 69635303 (+)
G291327 NA other downstream 1662164 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1828829 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1885951 69915810 ~ 69923807 (+)

Expression


Co-expression Network