G290082


Basic Information

Item Value
gene id G290082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68258430 ~ 68258666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328943
CCTtcaggttgcacatttaacatgctggtagaaatgaggtaaaactgatttaagtttccctgcattaaagtcaccggccaccgggagcgccgcctctggatgagtgttttcctgtttgcttatggcagaatacagctcatttaGTGCGGTTTTAGTGCAAACTTcgctgtggtggtatgtagacagctacgaaaagtACAGATGGAAACTCTCTATGTAGATTGTGTAGTCTACAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328943 True 237 lncRNA 0.45 1 68258430 68258666

Neighbor

gene id symbol gene type direction distance location
LOC110520465 btla coding upstream 37014 68216285 ~ 68221416 (+)
si:ch211-214p13.9 cd200r1 coding upstream 80657 68173648 ~ 68177773 (+)
LOC110504531 LOC106586650 coding upstream 143753 68058115 ~ 68114677 (+)
LOC110520463 LOC106586649 coding upstream 220474 68002305 ~ 68037956 (+)
lrrc58b LOC106586648 coding upstream 268489 67982331 ~ 67989941 (+)
si:ch73-390b10.2 gpr89 coding downstream 2748 68261414 ~ 68278415 (+)
LOC110504539 LOC106586655 coding downstream 65760 68324426 ~ 68365482 (+)
LOC118964318 NA coding downstream 75578 68334244 ~ 68337315 (+)
LOC110520472 LOC106586659 coding downstream 587842 68846508 ~ 68850315 (+)
LOC110504548 NA coding downstream 596106 68854772 ~ 68858737 (+)
G290078 NA non-coding upstream 1675 68256461 ~ 68256755 (+)
G289883 NA non-coding upstream 33124 68223725 ~ 68225306 (+)
G289933 NA non-coding upstream 57521 68200681 ~ 68200909 (+)
G289881 NA non-coding upstream 75234 68180062 ~ 68183196 (+)
G289840 NA non-coding upstream 201150 68057057 ~ 68057280 (+)
G290094 NA non-coding downstream 32005 68290671 ~ 68293010 (+)
G290126 NA non-coding downstream 97573 68356239 ~ 68361416 (+)
G290110 NA non-coding downstream 113277 68371943 ~ 68372280 (+)
G290224 NA non-coding downstream 137361 68396027 ~ 68396383 (+)
G290241 NA non-coding downstream 148537 68407203 ~ 68407433 (+)
G289517 NA other upstream 496007 67761737 ~ 67762423 (+)
G289486 NA other upstream 576308 67678862 ~ 67682122 (+)
G289455 NA other upstream 626220 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 738460 67519326 ~ 67520162 (+)
LOC110520478 LOC106586673 other downstream 1367677 69625755 ~ 69635303 (+)
G291327 NA other downstream 1436729 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1603394 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1660516 69915810 ~ 69923807 (+)
G291461 NA other downstream 1691001 69949667 ~ 69952168 (+)

Expression


Co-expression Network