XLOC_021723 (zgc:158263)


Basic Information

Item Value
gene id XLOC_021723
gene name zgc:158263
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 26733232 ~ 26751278 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043111
AGTTGTTGTAGACAAACCCAGTAACGAACACGAACAGTCAAATAAGCTTCGCACGAGATAACGAGGCAGACGGAGTTGGGCAAACTTATCAGATAAACTAACTTaagtttgttgatttgttttaGCACGGTCTATTTGTTTCTTTAAACGTGAGACTAAACTTCGAAATTTTTGCATGGATTAACTAACACTGAGCGCTCTTTGTGGCACCATGAGCTTCAACAGATAGCCCATGGAAACTATCGGAGTGTAGCGATGGAGACGGATATGGATTCGGTGAGAGTAGAATCCAGTCTGTGGATCGGTAATAAGCGCTACAGGGCTTTCCTGAGCGGATGGTACTTCAGCTGGACTGAGATCGATAAGGGGAACCGGGAGAAGAAAACAATTTCAGTGCCAGTGTCAGAGGTGATTGGGGTGAAGGAAGGCAGAGTTGAGATCCAACCCCAGAAGAAAGTAGAAGACACTGATCTTGATTTTActtTATTCCATGTGAATCGCAATAGCAGAGGTAACGCACAAGGACTGACGTGGAGTCTGGGCAGGACCCAGTTCTGCTGTCCTAGCCGGGCCGTCCGGGATCAATGGATCACTCAACACCGAACCGCGCTCAAAACCCACAGCCCCTCGCGTCCTCACAGGTTGTTGGTGTTCATTAATCCTTTCGGAGGAAAGAAGAGGGGGAAGCAGATCTTTCACTCTCTAGTGTCCCCTCTGTTTGAGCTGGCTGGCATCAGCTCTCATGTTGTGGtgacTGAACGAGCAAATCAGGCCAGAGACTACATCCTAAAGAAAGACTTAACAGGGTTTGATGGaGTGATATGTGTGGGCGGAGACGGAATGTTCAGTGAGTTGCTTCATGGTGTGATTGGACGAACGCAACAGGAGGCGGGAGTTTCAGAAAATGATCTTACTGCAATGCTGCAGCCATGTGACCTCCACATTGGTGTTATTCCAGCAGGCTCTACAGACTGTGTGTGTTTCACTACAGTGGGCATAAACGACCCTGTGACATCGGCACTGCACATCATCATTGGAGACTCTCAGCCTCTGGATGTGTGTTCTGTTCATGATCAGTCCACAGTGGTGCGTTATTCCGTTTCACTGGTGGGCTATGGTTTTTATGGCGATGTTCTGGAAGAGAGTGAGAGGCACCGCTGGATGGGCCCTCTCCGATATGATTATGCAGGTTGTATGGTTTACATGTGTAACAGAAGCTATTCGGGACTAGTGCAATATCTCCCTTCTGATTCCCAAATCTCCAGCCCACGGGACAACACTCGCTGTCTCTCAGgATGCCGAGTGTGTTCAGAGAGCAAAGAGCGGCTGTTTCCCCACTTTGACAGCTCCACCTCCCTCTACAGCTCTAATGTGAGCCAATACAGCACAGAGTTAGAGGGTGAATGGGTGACTGTTGAAGGCACATTCAAGTGCATCTCTCTTACGTGTGTGTCAAGCTCATGTCCACGAAGCCCAAAGGGTCTTTCGCCATCCGCTCACTTGGCCGATGGAACAGCAGACCTCATCCTTGTGCGAGACACTAACCCTCTAAGCTTTCTCACATACCTGCACaggcacacaaacaaacaggatCAGTTTGACCTGCCATTTGTTGAAGTCCATCGTGTCAAGGCAGTTCGGTTTTCTCTACCACCTGGAGAAGAAGAGGACtttgaggaggaggaagagaaaaTTCAGAGCTCCGCTGAGAGAGTACTGGAGGATCCTGGGAAACTCTGCAGTAATAACATTGCAGGTCATTCACAGCAGCATCTCACGGGTCAGAAAGAGAAAGCAACTTCAACCAGTAGATTAAAGAGACCAGGCTTTGTGTGCGGGCCCTGCTGTACTAAACCTCGCTCAGTATCAGTGTGGAACTGTGATGGAGAAATTCTGCCTCAGACTGAGATCTCTTGCAGAATACACGGTCAGCTGGTGCGGCTCTTCGCCAGGGGCATCGAGGATTCAACAAGAGCTTAATACCTAAAGCAGATGAAATACCATGCAAATAATATGAAAGATGAGAAAAGGGATGCACAGAGTGAATGTCCTGCATAAGGCAGAGCAGTGATGTCATTTGGAAGATATTTCAAAtgttacaatatattttttaatttaaaaaaaatccgaTCTGTCATAATTCAATTGattttacgtttttttgcagAGCAGAAAACTTATTTATGCAATATTAGAGTGCAAACTGAGCTATGctatttgttgctgttttttaaagaatttttgcACCTGTCACTCCAGAACATAAGTGATGAGTTGTCCTATTTGTTCTGGAGACACCACATTCTCTCTTGGGCTTGTACATGGGAGTGACAGTCACAGACGGGGAGTGACAGACGTGTTTTAAGGGAGTGGACTCATTCCAGTCAGCATTCTTACAGTGCAACTGGAATGTGTTTGTTCAGGACGATTTATTAGTATGTGTTTTCCCCAATAAAGCATCttttcaaaacttaattttactATTCTTATTATAAgatacattaaacacacacaatatatttaaatgttagcTACCAACATACAACCAATGCTTTTGTTTTTCCACAATAGTGTAATTGATCTGTGATAATGCTGCTTAATCATAATTTGCATACATGACACTGTGATACTGATACATTTATTCATACTTGTATAAATAGAGAAAGACTGAATTTATCTTTAATAAAATGCAACAAATTA

Function

symbol description
zgc:158263 Predicted to enable ceramide kinase activity. Predicted to be involved in ceramide metabolic process and phosphorylation. Orthologous to human CERK (ceramide kinase).

GO:

id name namespace
GO:0006665 sphingolipid metabolic process biological_process
GO:0006672 ceramide metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005575 cellular_component cellular_component
GO:0001727 lipid kinase activity molecular_function
GO:0001729 ceramide kinase activity molecular_function
GO:0003951 NAD+ kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070112-2262 Predicted to enable ceramide kinase activity. Predicted to be involved in ceramide metabolic process and phosphorylation. Orthologous to human CERK (ceramide kinase).

Ensembl:

ensembl_id ENSDARG00000037267

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043111 True 2700 mRNA 0.44 13 26733232 26751278

Neighbor

gene id symbol gene type direction distance location
XLOC_021722 NA coding upstream 108099 26591124 ~ 26625133 (+)
XLOC_021721 si:ch73-206d17.1 coding upstream 230711 26491931 ~ 26502521 (+)
XLOC_021720 ptpn22 coding upstream 552693 26142613 ~ 26180539 (+)
XLOC_021719 si:dkey-78k11.4 coding upstream 630437 26102028 ~ 26102795 (+)
XLOC_021718 atp6ap1b coding upstream 639054 26079467 ~ 26094178 (+)
XLOC_021724 CT573349.1 coding downstream 177465 26928743 ~ 26928858 (+)
XLOC_021725 cacnb3b coding downstream 195151 26946429 ~ 26959206 (+)
XLOC_021726 rnd1b coding downstream 227896 26979174 ~ 27006062 (+)
XLOC_021727 ptges3a coding downstream 300641 27051919 ~ 27059998 (+)
XLOC_021728 mipa coding downstream 316947 27068225 ~ 27072774 (+)
XLOC_021714 AL845287.1 non-coding upstream 738091 25995027 ~ 25995141 (+)
XLOC_021691 BX957326.2 non-coding upstream 2172359 24556455 ~ 24560873 (+)
XLOC_021689 NA non-coding upstream 2241195 24483312 ~ 24492037 (+)
XLOC_021687 CR925709.3 non-coding upstream 2584461 24148055 ~ 24148771 (+)
XLOC_021731 NA non-coding downstream 757589 27508867 ~ 27516273 (+)
XLOC_021738 NA non-coding downstream 1119461 27870739 ~ 27872705 (+)
XLOC_021742 NA non-coding downstream 1388481 28139759 ~ 28277430 (+)
XLOC_021745 NA non-coding downstream 1639391 28390669 ~ 28420584 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_09946111_09958162 NA coding CI01000001 null 9944120 ~ 9958246 (+)