XLOC_021780 (cables2a)


Basic Information

Item Value
gene id XLOC_021780
gene name cables2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 30898013 ~ 30919307 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043207
ATGGCGGCCGCCGCTTGCGGTCCTCGCGGCTGTCCGAGGACTAATTCAGCCAAACCACACAAAGAACTGCTGCGAAAAAGCCGGGATTCTCGTCGCAGACAAGCGGCGTTGTTGTTTCTCACTAATATATCTTTAGATGGACGCCCGGTTTACAACCTGAGCAATGGACTCGTTGGCCCCAGGGAAGTCGACAGCCGGTGTGTGGATGTCGGCGCGGCGGTGGCGGGTCTCCCTCTGTCGACAACCAGCAGCTACGGAACCTTCACCCAAGTGTCATCCTCCATTAGCGGAGGAGCTGCTACCCCTATACCGAGGACTAACGTTAACACTTACCCTGCTCCTATGAGCCCTCCTCCGGCGCTTAACCAAGGGAGCAGCGACGTTTTCACGGAGGATGGACGATCAGATCCTTTGTCAGTCCAGGCTCCCCCTCTATCACCGACCGCTGGACCTCGGAATACGGCTTTGGGATCCAGTAAATCCCCCAGCCAGTTCCCGAGCTCTAACCCTCTGCCTGATCCGCGTCAaagGACACGTAACCTCTCTGGATCTCCAGGGCCAAAGGTTTCCAAGAAGGTGCACTTCATCAAGAATATGAGGCAGTATGATACTCGAGGGAGCAGGGTTGTGCTGATCTGTGCCAAGAGATCCCTGTGTGCTGCTTTCTCTGTATTGCCCTATGGAGAGAGTTATCACATCAGTGACTCTAAGCTAGAAGCGCAGAGACAAAGACACTCTTCTGGTGGAGGATCTGATATGGTTCCTGGACTGGAGGGTGTGGAGGTGGACTTTGGAAAGACAGTATCATATGCCCGTTTCCTGCTGCCAACTAATGCCTTGGTGAGGCTGAAGAGCAGTGGCCAAACTGACATCAGCACAGCTCAAATGCCAATGTCACGAAACCGTATCAACGGGCAAAAGAACTTCACTCCTTCCCGAATCAGCAGCACAATTGGGCAAGATACAGGTGTGGACGAGCTGTCAGAGTATGATCCCAACTTACTGAGTGACCCTCAATGGCCTTGTGGGAAGCACAAACGAGTCTTAATTTTTGCATCGTATGTGACAACGGTTATTGAGTACGTGAAACCATCTGACTTGAAGAAAGACATGAACGAGACGTTCAAGGAGAAGTTTCCACACATAAAGTTGACATTCAGCAAAATCAGAAGTCTGAAAAGGGAGATGCGTTCAGTGAGTGAGGAGTGTGGCCTGCAGCCGGTGACCATCGCAATGGCTTACGTTTACTTTGAGAAACTGGTTCTGCAAGGGAGGCTAAACAAGCACAACCGGAAGCTGGTGTCTGCCGCCTGCGTATTACTGGCTGCCAAGATCAGCAGCGACCTTAAGAAACAGGAGGTCAAGCAGCTGATTGATAGGCTGGAGGAGCGTTTCCGAATAAACCGTAAAGAGTTGATTTCCCTGGAGTTCACGGTTCTGGTTGCCTTGGAGATGGCACTTTACCTCCCAGACAGCAAGGTCATGCCTCACTATCGCAGGCTGGTGCAGCAGGGCTGAAAAAAAAGGCACTTAAAGAGATAGTACACCGCAAAAATAAAGATTCTGTctttgtttactcaccctcatgatACTTAAAAGGATTTAATTACCCATACTGTGTGTTCAGCGCAGAAAAAAAGTAAACAGAAAACTGACACTAGGATTTAAATgtctactggtttccaacatcaTATAAAACATCTTTAGTGACCAGCAGATGAAAGTGGTGGGGTgaatgaatgatgtcagaatattcatttttgggtgaactatccctttaagagcttCCCGTGAGGACCAGAGAGTTGATTTTCATCTTATTCtggatgtttttttattattattattatttattgatcaaACAGATCACAAATATTTCTAGTGGTCTCATCTTCAGTCGTTTACTTTCTTCATGGAACTGATTTTATAAATCATCTAGAAAGAA

Function

symbol description
cables2a Predicted to act upstream of or within regulation of cell cycle. Orthologous to human CABLES2 (Cdk5 and Abl enzyme substrate 2).

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-091118-58 Predicted to act upstream of or within regulation of cell cycle. Orthologous to human CABLES2 (Cdk5 and Abl enzyme substrate 2).

Ensembl:

ensembl_id ENSDARG00000076964

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043207 True 1945 mRNA 0.48 9 30898013 30919307

Neighbor

gene id symbol gene type direction distance location
XLOC_021779 XKR7 coding upstream 7163 30859086 ~ 30890850 (+)
XLOC_021778 npbwr2a coding upstream 52154 30827959 ~ 30845859 (+)
XLOC_021777 AL845357.1 coding upstream 125127 30764287 ~ 30772886 (+)
XLOC_021776 asxl1 coding upstream 145460 30730121 ~ 30752553 (+)
XLOC_021775 dnajc11a coding upstream 173104 30707837 ~ 30724909 (+)
XLOC_021781 si:ch211-197l9.2 coding downstream 48379 30967686 ~ 30981438 (+)
XLOC_021782 BX649257.1 coding downstream 60078 30979385 ~ 30979499 (+)
XLOC_021783 si:ch211-197l9.2 coding downstream 66223 30985530 ~ 30996756 (+)
XLOC_021784 selenoi coding downstream 80936 31000243 ~ 31022418 (+)
XLOC_021785 NA coding downstream 159257 31078564 ~ 31085951 (+)
XLOC_021774 NA non-coding upstream 464628 30402314 ~ 30433385 (+)
XLOC_021767 NA non-coding upstream 1051134 29840859 ~ 29846879 (+)
XLOC_021766 BX571850.1 non-coding upstream 1309455 29588444 ~ 29588558 (+)
XLOC_021765 NA non-coding upstream 1314734 29580543 ~ 29583279 (+)
XLOC_021790 CR759830.1 non-coding downstream 513966 31433273 ~ 31433348 (+)
XLOC_021791 CR759830.2 non-coding downstream 514272 31433579 ~ 31433663 (+)
XLOC_021793 BX927365.3 non-coding downstream 748122 31667429 ~ 31667543 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_12602382_12613489 CABLES2A coding CI01000001 null 12601961 ~ 12613938 (+)