XLOC_021825 (CR381531.2)


Basic Information

Item Value
gene id XLOC_021825
gene name CR381531.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 33777519 ~ 33901337 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043275
agcaatattttaatttgagagagagagaaagcgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagatgtccaACTTTACACCATCCTATTAAAGGGCTCTGTCAGTGGGCTGTGCAACTTGCAGCACCAACTCAAAACAAGGCTTTCAACTGCTGGAACTGCATTAGGAGCTATCCGTGCTGAATTTGGGTCCTGAATCCTGCCAACATGATTGCCACCACACAGCAGAACATGACTACGGAGCTGcaGGATCTTGGTAGCTCAGGAGGACCTCCTCGAAATTGGAAGGGAATCGGTATCGCCATGGTGGTCATCCTGGGGGTCATGTCTCTTGTGACTCTTTCCATTTTTCTCCTCACACCCGATGAGTCCCATCTCCTACGGTTGTCTCGTCTCACTCTGGAGAACCTGGAGAGCGAGGATTTCCAAATTCACAACCCCTGTGCCACATGGCTAAGTGagCATGAAGTGTCACTGTGCACCCAGGAAGGTCATGTTTTAATTCACAATCTCAGCACCAATCTCACAACCACGCTATTGGACAACAGCACCCTGgATCTAAAGTCAATGAAGTTCCAGGTTTCTGCTGACAAGAGGTTCATCTTGATGGCGTATAATATCCAGCATGTATTCTCACAGTCCTTCACAGCATCCTTTGCAATCTACATAGTGTCCAGCGGggatATTGTGGACCTCACTCCGTCAGAGGAGGATACATCTGTGCTTCAGTATGCAGCGTGGGGACCTCAAGGGAACCAGCTGGTCTATGTGTTTGAGAATGACATCTACTACAAACCCGATGTGTCCAGCAAGGCGATGCGTCTGACAGCCTCGGGCAGGAAGGGAATGGTGGTTAATGGGCTTTCTGATTGGACATACGAAGAGGAGATATTGCTGAAATATCCTGCGTTCTGGTGGGCCAAAGATGGCGCGCGCCTGGCATATCTGTCCATCAATAACTCAGCAACTCCTTTTATGGAAATACATCACTTCCTGGGTGGGAGCTACCCTTCTAATGTCCTCTACCCATATCCAAAGGCGGGATCCAGAATCCCATCAGCCAGTCTGTTTGTGGTGAATTTATACGGTCCAGCGCACACATTAGAGATGTTTCCTCCAGACTCCCAGAACAGCAGGGACAGCTACATCTCTATGGTGAGCTGGATCAGCAGCACCCGCCTGACAGTGCGCTGGTTGAACCGTGTCCAGAATCAGTCGGTTCTGTGCGTATGCGAGGCCACGACTGGAGCCTGTTCAGAGAGACACCAAATGGCGATGGACTTCTGGCACAACAACCAGCGGCAGGAGGAGCCGCTGTTCACGGCAGATGGTTCCCTGTTTTACCTCATCCTGCCTGCCAAGCAAGGGGCCCGTGGGGAGTTTCTCCACATCGCCAGCCTCCCCGCTCAGGCTTCCTCTCCTTCAGTTTCTCCTCGCTTTCTAACATCAGGGAACTGGGATGTAATCTCACTGTGCGCCCTTGATGAGGAGAACGATAAAATCTATTTTCTGAGCGCGGAGGAGTCGCAGCAGAGCAGACACTTATACAGCGTGGAGCTTGGGGGAGTATTTCATCGGCAGTGTCTGACGTGTAACCTGTTTGAGCGCTGCAGCTTCTTCAGAGCAGACTTCAGCCCCAATCAGACATACTTCACTCTCTATTGCTTGGGCCCTGGTGTCCCAAAGGTGACCATTCACAGCACGAGTGACCCTTTCAGATACACTGTGGTGGAAGACAACAGCGTCCTCGCCATGTCTCTCGAAACCAAGCAGCTCCCTGAGACCCTTTACCACACACTTTCCTCCGACAACAGCGACCTAGATGTGAAGATGTCCCTGCCCCCTGGATATGAAGGAAACCTGCATCCTCTCCTCATTATCATTGACAGTATTCCAGGCAGGCCGTCAGTAACGGAGGAGTTTGCCCTGGGCTGGCCGGAGGTTTTGTCCAGTATGCATGGAGTGGCTCTTGCTTGGATCGATAGCAGAAGCAGAATCTCACAGACACAAAAAAGCAGCACGCTAGACCCTCGCAAGCTGGGTTCACTCCGCATTAAAGACAAGCTCGGAGTCGTGGAGTGGTTAATGAAGCTGCCGTACATCGACGCCAAAAGAATTGCAGTGTATGGAAAGGGATTCGGTGGCTATTTAGGTTTGAAGATGCTGACGGGAACCGATCAGATGTTCAGATGCGCTGCTGTTATGGCTCCCATCACAGACTTCAAGCTCTATAGTGCAGCCTTTTCTGAGCGATTTCTAGGCCTTCCAGCTAAAGAGGAGCATTCATACATGACTGCATCTTTGTTGGACGACATCCACAAGCTCAAAGACGAAAACTTCCTCCTCATACACGGGACCGCAGATGCGCGAGTGCATTTCCAACACAGCGCTGAGCTGTTGAGTCGTCTGGTGAAGGTAGAGGCCAACTACACCCTTCAGCTCTACCCAGACGAAGGCCACACTCTGAGGGAAGAGCGGAGCCAGCAGCACCTGCACCGCACCATCCTCCACTACCTTCACAACTGCCTCAAATACGACCCCTTCCTCAACatagaggaggaagaggaggacgaGGAGGAGGAAGAGTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104767

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043275 True 2625 mRNA 0.51 25 33777519 33901337

Neighbor

gene id symbol gene type direction distance location
XLOC_021824 CR354542.1 coding upstream 16854 33759747 ~ 33760665 (+)
XLOC_021823 si:ch211-210c8.6 coding upstream 19777 33752275 ~ 33757742 (+)
XLOC_021822 dazap2 coding upstream 47967 33718602 ~ 33729552 (+)
XLOC_021821 CT027694.1 coding upstream 239350 33538051 ~ 33538169 (+)
XLOC_021820 NA coding upstream 318254 33455563 ~ 33459265 (+)
XLOC_021827 cs coding downstream 6562 33907899 ~ 33928316 (+)
XLOC_021828 wu:fc63a07 coding downstream 32891 33934228 ~ 33953106 (+)
XLOC_021829 snrpg coding downstream 56013 33957350 ~ 33961989 (+)
XLOC_021830 plpbp coding downstream 62282 33963619 ~ 33976116 (+)
XLOC_021831 NA coding downstream 77374 33978711 ~ 33983432 (+)
XLOC_021817 dre-mir-205 non-coding upstream 487158 33290273 ~ 33290361 (+)
XLOC_021816 AL928610.1 non-coding upstream 658395 33119010 ~ 33119124 (+)
XLOC_021833 AL954678.1 non-coding downstream 101420 34002757 ~ 34002873 (+)
XLOC_021837 NA non-coding downstream 863606 34764943 ~ 34768352 (+)
XLOC_021838 CR352218.1 non-coding downstream 948378 34849715 ~ 34987363 (+)
XLOC_021839 NA non-coding downstream 1045110 34946447 ~ 34948499 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_03534862_03537560 NA coding CI01000001 null 3534307 ~ 3537560 (-)