XLOC_021874


Basic Information

Item Value
gene id XLOC_021874
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36364905 ~ 36365917 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044873
CACACTCCTATTGAAGAAAAGCACAGAGCTGTGGGACAGAGAAACAAGGTTTTGGAGATATTATCATGTGTAATAAAGGAAAAGAGCAAAGGGGAATCTGGAGTCGGTGGtaaccttcattaatctggggtcaccacagcggaatgaaccaccaacttatccagcacatgctttacgcagccgatgcccttccagctgcaccccatcactggggaacacccacacactctcattcacacgcatacactacgaactatttagctaacccaattcacctatagtctttggactgtgggggaaagcggagcacctggagcaaacctaagccaacacagggagaacatacaaactccacacagtaatacCAGCTAactcagccaaggctcaaaccagtgaccttcttgctgtgaggcgacagcgccaccccaaagataaaataaaatacacaatttttgAAGACAATATTCAGAGGCTATATTCAAGTCAAAGGGCAGATTCACCCACCCACCCCTTCAAGATTGTGGCTGTTTGTTTGAGCAAACAAATCTAAAATACctggaattaaataaaaatatacgcaaaaaataaatactttaccACACGGAAATTTTAAATGTGGGAATTGTTTACAATGCAACTTCACATACAAAACGTCCATTTTTACACATCCCCATACAGCCAAAAAGTTCAAAATTCGAGACACTATTTTGTGCAAGACCGCTAACGTAATCTATATGTTGCGGTGCCCGTGTTGTTTGTTATGCAAGTAAGATGAGTAGGCCTTTAAAAATTCGCATTTCTGAACATTGATGCGCTATTCGACATTATGATCAGAGAAGTCCTGTTGTGCAGCATTTCTTCTGTTATGAGACATTCTGTCTCCACTCTACAATGCAAAGGGATTGAAGTTGTGAAGTGTCCATGTTGAAGGGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044873 True 934 lncRNA 0.42 2 36364905 36365917

Neighbor

gene id symbol gene type direction distance location
XLOC_021873 copz1 coding upstream 10799 36340520 ~ 36354106 (+)
XLOC_021872 NA coding upstream 45317 36319178 ~ 36319588 (+)
XLOC_021871 NA coding upstream 46992 36317349 ~ 36317913 (+)
XLOC_021870 hnrnpa1b coding upstream 54487 36306539 ~ 36310418 (+)
XLOC_021869 hoxc1a coding upstream 173917 36178104 ~ 36190988 (+)
XLOC_021875 NA coding downstream 52202 36418119 ~ 36420278 (+)
XLOC_021876 NA coding downstream 92430 36458347 ~ 36488629 (+)
XLOC_021877 FO704757.1 coding downstream 125197 36491114 ~ 36491234 (+)
XLOC_021878 NA coding downstream 219262 36585179 ~ 36585751 (+)
XLOC_021879 igfbp6b coding downstream 236067 36601984 ~ 36605837 (+)
XLOC_021868 BX005254.2 non-coding upstream 210494 36150430 ~ 36154411 (+)
XLOC_021866 dre-mir-10b-2 non-coding upstream 234813 36130001 ~ 36130092 (+)
XLOC_021861 mir196a-1 non-coding upstream 276709 36088091 ~ 36088196 (+)
XLOC_021884 dre-mir-2191 non-coding downstream 424306 36790223 ~ 36790332 (+)

Expression


Co-expression Network