XLOC_021914



Basic Information


Item Value
gene id XLOC_021914
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 38537568 ~ 38555295 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044897
ACTACATCTTTTCTGATGGCATCACAGGCAATTAGCAAGATGATGCTGCACAAAACCATCTGGACGGACACATTTCATGTTGCTGGGGGGAGACAGTTTTTGGCATGATAAAAATACATCCCAAGGTCAGATCGGAAGGCGTTGGAAGTATCAGATTCGAAAAGAGCCGGAGCATGAAAATGACTGGCGCTGTCACTGTTGGGGAACATCACTCTTCTAAACAGGACCTGGCTGCCGGACTGTCACCAGTATGGTTATCCTTCACCACAGGCTGACGGAGGCATTATTCCGATGGGGATTGTTTGACTAATAAGCATTTTGTCTGGACAAGCACAGGCTCCAGTCAATGTTGTCCTGAGCTTGGAAAGGACACCTTGTTCATGGGGCGCCGATGGACACCATTAAATAAAGTGACTCATCTGTTAAATGCCCTTGAGATTTATTGGGcaaattatattacattgtaaATGGTAAAAAGTTAGATTAACTCAATTGCTTAGTATTAGCATCATATTGTATATCTAATAGACAGTGTTGAGGAGGTTACTTtgaaaat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044897 True 556 lncRNA 0.43 2 38537568 38555295

Neighbor


gene id symbol gene type direction distance location
XLOC_021913 FO904868.1 coding upstream 201684 38335760 ~ 38335884 (+)
XLOC_021912 CABZ01070579.1 coding upstream 240779 38266163 ~ 38296789 (+)
XLOC_021911 znf217 coding upstream 273788 38245610 ~ 38263780 (+)
XLOC_021910 zgc:112994 coding upstream 354811 38159715 ~ 38182757 (+)
XLOC_021909 NA coding upstream 443008 38091326 ~ 38094560 (+)
XLOC_021915 zfp64 coding downstream 251566 38806861 ~ 38819116 (+)
XLOC_021916 sall4 coding downstream 385405 38940700 ~ 39063597 (+)
XLOC_021917 nfatc2a coding downstream 534279 39089574 ~ 39164866 (+)
XLOC_021918 CABZ01054023.1 coding downstream 627951 39183246 ~ 39184309 (+)
XLOC_021919 kcng1 coding downstream 725934 39281229 ~ 39333313 (+)
XLOC_021906 NA non-coding upstream 611495 37842256 ~ 37926073 (+)
XLOC_021907 NA non-coding upstream 632872 37904470 ~ 37904696 (+)
XLOC_021926 NA non-coding downstream 1197193 39752488 ~ 39752964 (+)
XLOC_021932 CABZ01067001.1 non-coding downstream 1750949 40306244 ~ 40306371 (+)
XLOC_021935 CR354556.1 non-coding downstream 1911207 40466502 ~ 40472088 (+)
XLOC_021936 CR354556.3 non-coding downstream 1921925 40477220 ~ 40480582 (+)

Expression



Co-expression Network