XLOC_021919 (kcng1)


Basic Information

Item Value
gene id XLOC_021919
gene name kcng1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 39281229 ~ 39333313 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043403
CTCTTGGAAAAAATGGCACATCCCACCACTGATgtcagagctgtgtgtgtgtgtgtgaagagggAGGGAACTGGAGCCTGTTGCTCAGATCATCAAATGTGCCGCCAGAAGCTCCAGAAGCCTGTGGACGATCACACTGAGTTCATCACACTGCGCTTCTGCTTTCAGAGTTGAAGAAATACCATGAGTATTCTCAAGTGCACATGAACTACGGTCACTCTGTGAGAGGACGCTCTGGACTCCGGCATGTGACTGAGCTGAAAGATGACTTTACTGGCAGGCGATGGTTCGGATTATGACTACAGCGCACTGAGCTGCACCTCTGACACCTCTCTGAACGCTCCACCCGTCCACGAGCAGGAGGCCCTCAAGGGGGTTTATTACAAACGGGCGCAGCGGCTGCCTCCAACCGACCCAAACTTCACCGATGCCCTCCATCCCGACGCCAGCCTGCCGTCCTGCGCTCAGCGGCTGCACGTCATCATCAATGTTGGCGGCCTGCGTTACCAGTTCCCCTGGACCACTCTGGAGGATTTCCCCCTATCACGTTTGGGCCAGTTGCGTCTGTGCAGCACTTTCGACGAAATCATGCACATATGCGATGATTATGACGTGGTCCACAACGAGTTCTTTTTCGACCGGAGTCCCTGTGCCTTTCGCACTATCCTGACCTTCCTACGCGCCGGGAAACTGCGCTCTCTGCGGGAGATGTGTGCTCTGTCCTTCCAGGAGGAGCTGCTGTACTGGGGTGTCCCAGAGGAGAGTCTGGAGTGGTGCTGTCGGCGGAGGCTCCTGCAGCGGGTGGAGGAGTGTGATGAGCTGGAGCGCGTGGCGGAGGAGGACGAGGAGGATGAAGACGACAGCGAGAGTGGTTTGGCCAGGGAGTCTCGTCTGGGACGCTGCATGGGGAAACTGAGGGACATGGTGGAGAAACCGCACTCAGGGCTGCCAGGGAAGATCTTCGCCTGTCTGTCGGTCCTGTTCGTCACAATAACAGCCATCAATCTGTCCATAAGCACCATGCCTGCCATGAGGGAGGAGGAGGAGACTGGCAAATGCTCTCAGATGTGCTACAACATCTTCATCGTGGAGACGGTGTGCGTGGCCTGGTTCTCGCTGGAGTTCACTCTGCGCTTCATCCAGGATCGCAGCAAGCTTGCCTTCCTCCGCCGGCCGCTCAACCTAATCGACGTCATCGCCATCCTGCCCTACTACATCACGCTGGTGGTGGACAGCACCTCCACGGGGGAGAAGCGCCTAGGCTCGGGCAGCAGTTACCTGGACAAAGTGGGCCTTGTGCTGCGTGTTCTGCGGGCGCTGCGGATCCTCTACGTTATGCGTCTGGCAAGACACTCGCTGGGACTCCAAACACTTGGTTTGACAGCGCGTAGATGTACACGAGAGTTCGGTTTACTCCTGCTATTCCTCTGCGTCGCGATAGCGCTTTTTTCCCCACTGCTCTACCTGATTGAAAACGAAGCCGCAGCCACGAGGGAGTTCAGTAGCATCCCTGCCACATACTGGTGGGCTGTTATTACAATGACCACGGTTGGATATGGAGATATGGTGCCGCGCAGTATCCCAGGACAGGTGGTAGCACTTAGCAGTATCCTCAGTGGGATCCTGCTCATGGCGTTCCCGGTAACCTCCATCTTCCACACTTTTTCCCGCTCCTACGTAGAGCTCAAGCAGGAACAACAGCGGCTGCTCCAGCGCAGGACTCACTTCCTACTGCGCAGCCGCATCGCAGGGCTGGGCAGCGACCTGTCGTTGGAAAGTGATGTGCTGTTTCCTAGTGTGTCATCTGAACATAGAAACCGAGAGGAGTAAACGTACTGAATTGAGGATGTGTGGAATATGAAGCAgcttctattttttttatatcttgaATATTGTATTGTGTATTATTCGACAACAGTTTTTTTAAAGACATGCTCAGTTCTGAACCATCCAGCAGAGTTTAAAGTGTTCCTATTATGTAAAGTGATTCACTCAGATCAAGTTTGATTCATGGTTTTGATTTCACCATTATGACGTTTCAATTCCCTGaaaccttcgttcatcttcaaaCCAcatatgaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCGCATTGCAGTTCTGAGTAGCGACCTGTTTTAGTTTCCCCCaataaattctgttattaattactcaccattATGTCATTTCAATCCCCCCGaaaccttcgttcatcttcagaacacaaattaagatattttagatgtaatcctggagctctctcatcctacTTCGCAGCCACATTGCAACTCTGTATAGCGACTTGATTTAGTCCCCCCCAATAAATTGTGTTATTAATT
>TCONS_00043404
CTCTTGGAAAAAATGGCACATCCCACCACTGATgtcagagctgtgtgtgtgtgtgtgaagagggAGGGAACTGGAGCCTGTTGCTCAGATCATCAAATGTGCCGCCAGAAGCTCCAGAAGCCTGTGGACGATCACACTGAGTTCATCACACTGCGCTTCTGCTTTCAGAGTTGAAGAAATACCATGAGTATTCTCAAGTGCACATGAACTACGGTCACTCTGTGAGAGGACGCTCTGGACTCCGGCATGTGACTGAGCTGAAAGATGACTTTACTGGCAGGCGATGGTTCGGATTATGACTACAGCGCACTGAGCTGCACCTCTGACACCTCTCTGAACGCTCCACCCGTCCACGAGCAGGAGGCCCTCAAGGGGGTTTATTACAAACGGGCGCAGCGGCTGCCTCCAACCGACCCAAACTTCACCGATGCCCTCCATCCCGACGCCAGCCTGCCGTCCTGCGCTCAGCGGCTGCACGTCATCATCAATGTTGGCGGCCTGCGTTACCAGTTCCCCTGGACCACTCTGGAGGATTTCCCCCTATCACGTTTGGGCCAGTTGCGTCTGTGCAGCACTTTCGACGAAATCATGCACATATGCGATGATTATGACGTGGTCCACAACGAGTTCTTTTTCGACCGGAGTCCCTGTGCCTTTCGCACTATCCTGACCTTCCTACGCGCCGGGAAACTGCGCTCTCTGCGGGAGATGTGTGCTCTGTCCTTCCAGGAGGAGCTGCTGTACTGGGGTGTCCCAGAGGAGAGTCTGGAGTGGTGCTGTCGGCGGAGGCTCCTGCAGCGGGTGGAGGAGTGTGATGAGCTGGAGCGCGTGGCGGAGGAGGACGAGGAGGATGAAGACGACAGCGAGAGTGGTTTGGCCAGGGAGTCTCGTCTGGGACGCTGCATGGGGAAACTGAGGGACATGGTGGAGAAACCGCACTCAGGGCTGCCAGGGAAGATCTTCGCCTGTCTGTCGGTCCTGTTCGTCACAATAACAGCCATCAATCTGTCCATAAGCACCATGCCTGCCATGAGGGAGGAGGAGGAGACTGGCAAATGCTCTCAGATGTGCTACAACATCTTCATCGTGGAGACGGTGTGCGTGGCCTGGTTCTCGCTGGAGTTCACTCTGCGCTTCATCCAGGATCGCAGCAAGCTTGCCTTCCTCCGCCGGCCGCTCAACCTAATCGACGTCATCGCCATCCTGCCCTACTACATCACGCTGGTGGTGGACAGCACCTCCACGGGGGAGAAGCGCCTAGGCTCGGGCAGCAGTTACCTGGACAAAGTGGGCCTTGTGCTGCGTGTTCTGCGGGCGCTGCGGATCCTCTACGTTATGCGTCTGGCAAGACACTCGCTGGGACTCCAAACACTTGGTTTGACAGCGCGTAGATGTACACGAGAGTTCGGTTTACTCCTGCTATTCCTCTGCGTCGCGATAGCGCTTTTTTCCCCACTGCTCTACCTGATTGAAAACGAAGCCGCAGCCACGAGGGAGTTCAGTAGCATCCCTGCCACATACTGGTGGGCTGTTATTACAATGACCACGGTTGGATATGGAGATATGGTGCCGCGCAGTATCCCAGGACAGGTGGTAGCACTTAGCAGTATCCTCAGTGGGATCCTGCTCATGGCGTTCCCGGTAACCTCCATCTTCCACACTTTTTCCCGCTCCTACGTAGAGCTCAAGCAGGAACAACAGCGGCTGCTCCAGCGCAGGACTCACTTCCTACTGCGCAGCCGCATCGCAGGGCTGGGCAGCGACCTGTCGTTGGAAAGTGATGTGCTGTTTCCTAGTGTGTCATCTGAACATAGAAACCGAGAGGAGTAAACGTACTGAATTGAGGATGTGTGGAATATGAAGCAgcttctattttttttatatcttgaATATTGTATTGTGTATTATTCGACAACAGTTTTTTTAAAGACATGCTCAGTTCTGAACCATCCAGCAGAGTTTAAAGTGTTCCTATTATGTAAAGTGATTCACTCAGATCAAGTTTGATTCATGGTTTTGATTTCACCATTATGACGTTTCAATTCCCTGaaaccttcgttcatcttcaaaCCAcatatgaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCGCATTGCAGTTTTGAGTAGCGACCAGTTTTAGTTTCCCCCaataaattctgttattaattactcaccattATGTCATTTCAATCCGCCCGaaaccttcgttcatcttcaaaacacaaatgaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCACATTGCAACTCTGTATAGCGACTTGATTTAGTCCCCCCCCTCAATAAATTGTGTTATTAATT
>TCONS_00043405
AAGCTTGCCTTCCTCCGCCGGCCGCTCAACCTAATCGACGTCATCGCCATCCTGCCCTACTACATCACGCTGGTGGTGGACAGCACCTCCACGGGGGAGAAGCGCCTAGGCTCGGGCAGCAGTTACCTGGACAAAGTGGGCCTTGTGCTGCGTGTTCTGCGGGCGCTGCGGATCCTCTACGTTATGCGTCTGGCAAGACACTCGCTGGGACTCCAAACACTTGGTTTGACAGCGCGTAGATGTACACGAGAGTTCGGTTTACTCCTGCTATTCCTCTGCGTCGCGATAGCGCTTTTTTCCCCACTGCTCTACCTGATTGAAAACGAAGCCGCAGCCACGAGGGAGTTCAGTAGCATCCCTGCCACATACTGGTGGGCTGTTATTACAATGACCACGGTTGGATATGGAGATATGGTGCCGCGCAGTATCCCAGGACAGGTGGTAGCACTTAGCAGTATCCTCAGTGGGATCCTGCTCATGGCGTTCCCGGTAACCTCCATCTTCCACACTTTTTCCCGCTCCTACGTAGAGCTCAAGCAGGAACAACAGCGGCTGCTCCAGCGCAGGACTCACTTCCTACTGCGCAGCCGCATCGCAGGGCTGGGCAGCGACCTGTCGTTGGAAAGTGATGTGCTGTTTCCTAGTGTGTCATCTGAACATAGAAACCGAGAGGAGTAAACGTACTGAATTGAGGATGTGTGGAATATGAAGCAgcttctattttttttatatcttgaATATTGTATTGTGTATTATTCGACAACAGTTTTTTTAAAGACATGCTCAGTTCTGAACCATCCAGCAGAGTTTAAAGTGTTCCTATTATGTAAAGTGATTCACTCAGATCAAGTTTGATTCATGGTTTTGATTTCACCATTATGACGTTTCAATTCCCTGaaaccttcgttcatcttcaaaCCAcatatgaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCACATTGCAACTCTGTATAGCGACTTGATTTAGTCCCGCCCCCCCCAATAAATTGTGTTATTAATTACCATTATGTTGTATCAATCCCCTGAAACCTTTGTttatcttcacaacacaaatcaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCGCATTGCAGTTCTGAGTAGCGACCTGTTTTAGTTTCCCCCaataaattctgttattaattactcaccattATGTCATTTCAATCCCCCCGaaaccttcgttcatcttcagaacacaaattaagatattttagatgtaatcctggagctctctcatcctacTTCGCAGCCACATTGCAACTCTGTATAGCGACTTGATTTAGTCCCCCCCAATAAATTGTGTTATTAATTACCATTATGTTGTATCAATCCCCTGAAACCTTTGTttatcttcacaacacaaatcaagatattttagATGTAATCCTGGAGCTCTCATACTACTGCGCAGCCGCATTGCAGGGCTGGGCAGCGACCTGTCGTTGGAAAGTGATGTGCTGTTTCCTAGTGTGTCATCTGAACATAGAAACCCAGAAGAGTAAACATACTGAATTGAGGATGTGTGGAATATGAAGCAgcttctattttttttatatcttgaatattgtattatgtattattcgacagcagtttttttttaaagacatgctCAGTTCTGAACCATCCAGCAGAGTTTAAAGTGTTCCTATTATGTAAAGTGATTCACTCAGATCAAGTTTGATTCATGGCTTTAATTTCACCATTATGAAGTTTCAACTCCCTGaaaccttcgttcatcttcaaaCCAcatatgaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCGCATTGCAGTTTTGAGTAGCGACCAGTTTTAGTTTCCCCCaataaattctgttattaattactcaccattATGTCATTTCAATCCGCCCGaaaccttcgttcatcttcaaaacacaaatgaagatattttagatgtaatcctggagctctctcatcctacTGCGCAGCCACATTGCAACTCTGTATAGCGACTTGATTTAGTCCCCCCCCTCAATAAATTGTGTTATTAATTA

Function

symbol description
kcng1 Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of delayed rectifier potassium channel activity. Predicted to act upstream of or within several processes, including potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Orthologous to human KCNG1 (potassium voltage-gated channel modifier subfamily G member 1).

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0006813 potassium ion transport biological_process
GO:1902259 regulation of delayed rectifier potassium channel activity biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005216 ion channel activity molecular_function
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function
GO:0005251 delayed rectifier potassium channel activity molecular_function
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
ko04040 Ion channels

ZFIN:

id description
ZDB-GENE-080220-5 Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of delayed rectifier potassium channel activity. Predicted to act upstream of or within several processes, including potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Orthologous to human KCNG1 (potassium voltage-gated channel modifier subfamily G member 1).

Ensembl:

ensembl_id ENSDARG00000099038

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043403 False 2357 mRNA 0.52 4 39281229 39332589
TCONS_00043404 False 2360 mRNA 0.52 4 39281229 39333312
TCONS_00043405 True 2098 mRNA 0.44 1 39331216 39333313

Neighbor

gene id symbol gene type direction distance location
XLOC_021918 CABZ01054023.1 coding upstream 96920 39183246 ~ 39184309 (+)
XLOC_021917 nfatc2a coding upstream 116363 39089574 ~ 39164866 (+)
XLOC_021916 sall4 coding upstream 217632 38940700 ~ 39063597 (+)
XLOC_021915 zfp64 coding upstream 462113 38806861 ~ 38819116 (+)
XLOC_021914 NA coding upstream 725934 38537568 ~ 38555295 (+)
XLOC_021920 src coding downstream 13461 39346774 ~ 39450700 (+)
XLOC_021921 mical1 coding downstream 128676 39461989 ~ 39528988 (+)
XLOC_021922 camk1gb coding downstream 225195 39558508 ~ 39597901 (+)
XLOC_021923 g0s2 coding downstream 272795 39606108 ~ 39607679 (+)
XLOC_021924 otud3 coding downstream 278375 39611688 ~ 39626681 (+)
XLOC_021913 FO904868.1 non-coding upstream 945345 38335760 ~ 38335884 (+)
XLOC_021912 CABZ01070579.1 non-coding upstream 984440 38266163 ~ 38296789 (+)
XLOC_021909 NA non-coding upstream 1186669 38091326 ~ 38094560 (+)
XLOC_021926 NA non-coding downstream 419175 39752488 ~ 39752964 (+)
XLOC_021932 CABZ01067001.1 non-coding downstream 972931 40306244 ~ 40306371 (+)
XLOC_021935 CR354556.1 non-coding downstream 1133189 40466502 ~ 40472088 (+)
XLOC_021936 CR354556.3 non-coding downstream 1143907 40477220 ~ 40480582 (+)
XLOC_021937 NA non-coding downstream 1191081 40524394 ~ 40526983 (+)

Expression


Co-expression Network