G234313


Basic Information

Item Value
gene id G234313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21258906 ~ 21259200 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267832
tcttccacgataaattccataatttggtgttttgttgataaTAGAAAACGCGTTCTCAGGCACTGCTCCAGAATCActtccataagtgttcaattgggttgagatcttgTGACCACTATCGCCCTGTGGATGGGAGTATTGTCATCTTATGGGAGCATAGCCATGGTAGCAAAAAGAATGGCAAAAAtaattttatacatgaccctaagcatgatgggatgttaattgcttaacaTTAATTGCTTAAgcatctgctttcaatatactttgtattccccatttccattattttggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267832 True 295 lncRNA 0.38 1 21258906 21259200

Neighbor

gene id symbol gene type direction distance location
dcst1 dcst1 coding downstream 19116 21230669 ~ 21239790 (-)
LOC110513176 LOC106605439 coding downstream 28840 21198765 ~ 21230066 (-)
LOC110513123 LOC106580095 coding downstream 86426 21168140 ~ 21172480 (-)
LOC110513075 NA coding downstream 106550 21135542 ~ 21152356 (-)
LOC110513063 thbs3 coding downstream 125011 21112222 ~ 21133895 (-)
LOC110513266 LOC106580174 coding upstream 49644 21308844 ~ 21320007 (-)
LOC110503878 LOC106605446 coding upstream 60992 21320192 ~ 21331512 (-)
LOC110513307 polr3gl coding upstream 116624 21375824 ~ 21388805 (-)
LOC118946634 NA coding upstream 157011 21416211 ~ 21420278 (-)
LOC110513321 LOC106580205 coding upstream 179346 21438546 ~ 21455972 (-)
G234223 NA non-coding downstream 83581 21174681 ~ 21175325 (-)
G234332 NA non-coding upstream 10651 21269851 ~ 21270146 (-)
G234378 NA non-coding upstream 33675 21292875 ~ 21293076 (-)
G234387 NA non-coding upstream 46888 21306088 ~ 21306323 (-)
G234396 NA non-coding upstream 76336 21335536 ~ 21335999 (-)
G234224 LOC106605437 other downstream 78224 21178597 ~ 21180682 (-)
glipr2l LOC106605424 other downstream 607210 20648378 ~ 20652052 (-)
G233513 LOC106561082 other downstream 706909 20551783 ~ 20551997 (-)
G233052 LOC106605397 other downstream 1502288 19756204 ~ 19757908 (-)
G232980 NA other downstream 1610277 19648086 ~ 19648629 (-)
G234600 NA other upstream 210461 21469661 ~ 21469945 (-)
G234621 NA other upstream 239208 21498408 ~ 21498832 (-)
G235092 LOC100194668 other upstream 479645 21738845 ~ 21743411 (-)
LOC118946878 NA other upstream 485251 21744425 ~ 21755710 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G198045 NA non-coding NC_047606.1 CM018552.1 17405703 ~ 17411141 (+)