G251773


Basic Information

Item Value
gene id G251773
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36511574 ~ 36579307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU287064
GGTTTAGATGgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaatataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaagtgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggttggatggag
>TU287065
GGTTTAGATGgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaatataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaagtgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgatacatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaaactttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtgtcagaccactgcaaaactaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttattaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcacactgaacacaccatcccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287064 False 279 lncRNA 0.38 3 36511574 36579307
TU287065 True 945 TUCP 0.42 2 36511574 36525173

Neighbor

gene id symbol gene type direction distance location
rcc1 rcc1 coding upstream 124358 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 143258 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 210005 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 249607 36172193 ~ 36262289 (+)
serinc2l LOC106584332 coding upstream 366987 36125327 ~ 36144587 (+)
LOC110519932 LOC106591969 coding downstream 78160 36657467 ~ 36659553 (+)
LOC110519936 LOC106586041 coding downstream 839799 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 906276 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 1109481 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 1169388 37748695 ~ 37756709 (+)
G251748 NA non-coding upstream 41895 36467008 ~ 36469679 (+)
G251724 NA non-coding upstream 76820 36426505 ~ 36434754 (+)
G251720 NA non-coding upstream 78447 36408279 ~ 36433127 (+)
G251722 NA non-coding upstream 86490 36418497 ~ 36425084 (+)
G251721 NA non-coding upstream 88106 36411953 ~ 36423468 (+)
G251826 NA non-coding downstream 5215 36584522 ~ 36584736 (+)
G251832 NA non-coding downstream 14331 36593638 ~ 36593848 (+)
G251835 NA non-coding downstream 17359 36596666 ~ 36596872 (+)
G251840 NA non-coding downstream 31577 36610884 ~ 36611314 (+)
G251869 NA non-coding downstream 73955 36653262 ~ 36653492 (+)
LOC110519579 gmeb1 other upstream 1290202 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 1338111 35153546 ~ 35173463 (+)
G249323 NA other upstream 2090962 34419890 ~ 34420612 (+)
G249245 NA other upstream 2208667 34302572 ~ 34302907 (+)
G248795 NA other upstream 2498517 34006158 ~ 34013057 (+)
G251845 zdhhc18 other downstream 44303 36623610 ~ 36627542 (+)
G253299 NA other downstream 1147641 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 1513015 38092322 ~ 38092734 (+)
G254204 NA other downstream 1861859 38441166 ~ 38441734 (+)
G254445 NA other downstream 2021180 38600487 ~ 38600866 (+)

Expression


Co-expression Network