XLOC_022053


Basic Information

Item Value
gene id XLOC_022053
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 369131 ~ 369997 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044922
CTCAAAATGACCATATCCATGACACGACTGCATGTTGACATTATTTCAACATGGAGAAACATGCATGAGATGCTAAATGAAAGCATGCACATGTTTATTGTCTGAATCattcattaataaacaaacatgaaGAGATCAATTTTACAGTTTGCCGACTCTTTACTtgaaaggggtgttcataagacacctttataatcatgatatgacACATGTCGTGAATATAAATGGGATTTTATGCATAATATTGACATTATTTAGTGCatatgttcaaatgtttttgttgaAACACCATTAGACGATCTCAGCAAACAATACAACAGTTAAACACTTGTGTGTCTTCAAGGGCGTCTCTTAGCTTAGACAATCTAAACCAACAATTTATCTCagtcaggggtgtctaaactcagtcctggagggccgagtttgagcacccctgctcgAAGTAAACAACACAATAGTTGAACGCTTATGTATCTTCATGTGCGTTCCATAGATTAAACAATCTAAATAAGCAATATAGTGAACTTCACATGCGTcccatgtttattcattcattcgttttcttttcagcctagtccctttattaatccagggtcgccacagcagaatgaaccgccaacttatccagcatatggtttagaTGAACAAAAGAAACAACACAGTATTTGAACACTGGTGTATCTTCATCTATATCTCGTGTTGAAAATCTGCAGGAGGCTCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044922 True 722 lncRNA 0.37 2 369131 369997

Neighbor

gene id symbol gene type direction distance location
XLOC_022052 uhrf1bp1 coding downstream 17196 320624 ~ 351935 (-)
XLOC_022051 anks1aa coding downstream 62335 280046 ~ 306796 (-)
XLOC_022050 anks1aa coding downstream 97409 255409 ~ 271722 (-)
XLOC_022049 NA coding downstream 115902 250690 ~ 253229 (-)
XLOC_022048 hdac7a coding downstream 331077 16796 ~ 38054 (-)
XLOC_022054 tspan2b coding upstream 53354 423351 ~ 452365 (-)
XLOC_022055 si:ch73-181d5.4 coding upstream 87572 457569 ~ 478201 (-)
XLOC_022056 hm13 coding upstream 110426 480423 ~ 493384 (-)
XLOC_022057 col9a3 coding upstream 125517 495514 ~ 524780 (-)
XLOC_022058 samhd1 coding upstream 156505 526502 ~ 545942 (-)
XLOC_022068 NA non-coding upstream 648887 1018884 ~ 1034033 (-)
XLOC_022071 NA non-coding upstream 707919 1077916 ~ 1079365 (-)
XLOC_022072 NA non-coding upstream 733198 1103195 ~ 1106137 (-)
XLOC_022073 CABZ01079870.1 non-coding upstream 748308 1118305 ~ 1123971 (-)
XLOC_022074 CABZ01079872.1 non-coding upstream 754517 1124514 ~ 1140060 (-)

Expression


Co-expression Network