XLOC_022068


Basic Information

Item Value
gene id XLOC_022068
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 1018884 ~ 1034033 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044925
GTACGCCTTTAAATTGGACACACACCAGCCAAACCTCGCTCCTGAATATTTCTTCCCACAGTGGAGTCTTCGGATGAGTCTGAAAGCTCTTCTTCATCTTCCTCTTCCTCAAAATCTGAGGACTCGACAGGAGCAAAAATACTGATGTCCATCTCTGGATCTTCATCTTCAAGCTTCACTACGACGAACTGACTGTTTGTGTCCTCTTCATAACAGTTCGAGCAACTCTGAGGGCGAGAATCTGCATCCGAATTAACTTTATCCTTCATTTCGAGAGTCCAGACGCACACTTTTCCTGGAGGAAATACCTATTTGAGCTTCTCAGatgctcacctgacgtcacaacttaaccgagctctgcagaagagcatctctgaacacacaacacatccaaccttgaggcggatgggctacagcagcagaagagca

Function

GO:

id name namespace
GO:0009798 axis specification biological_process
GO:0045110 intermediate filament bundle assembly biological_process
GO:0000578 embryonic axis specification biological_process
GO:0061053 somite development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044925 True 429 lncRNA 0.47 2 1018884 1034033

Neighbor

gene id symbol gene type direction distance location
XLOC_022067 cdh26.1 coding downstream 1279 980001 ~ 1017605 (-)
XLOC_022066 cdh26.2 coding downstream 49040 934927 ~ 969844 (-)
XLOC_022065 rhoac coding downstream 106067 900955 ~ 912817 (-)
XLOC_022064 rbm10 coding downstream 118089 827248 ~ 900795 (-)
XLOC_022063 CU927920.1 coding downstream 228264 789493 ~ 790620 (-)
XLOC_022069 zgc:113423 coding upstream 8591 1042624 ~ 1056808 (-)
XLOC_022070 si:ch1073-272j17.3 coding upstream 24083 1058116 ~ 1065435 (-)
XLOC_022071 NA coding upstream 43883 1077916 ~ 1079365 (-)
XLOC_022072 NA coding upstream 69162 1103195 ~ 1106137 (-)
XLOC_022073 CABZ01079870.1 coding upstream 84272 1118305 ~ 1123971 (-)
XLOC_022053 NA non-coding downstream 648887 369131 ~ 369997 (-)
XLOC_022049 NA non-coding downstream 765655 250690 ~ 253229 (-)
XLOC_022074 CABZ01079872.1 non-coding upstream 90481 1124514 ~ 1140060 (-)
XLOC_022076 NA non-coding upstream 143362 1177395 ~ 1179164 (-)

Expression


Co-expression Network