XLOC_022160


Basic Information

Item Value
gene id XLOC_022160
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 8835967 ~ 8836338 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044957
CCCCATTAAAAGTCAAGTCTCTTTCTCTGtctagctctctctctctttctttctctggaGTAGGAAGTTCTATGATTAGCTCTCTCTAGGAGTCTCTCCATCTGCCAAGGTCAGGAGCTCTTATCAGCTCTGCTGCAGCTGCCTGTCCAGCACAACACAACTATAACACAACAACCCCAACAGAGGACAAATGAGACAGAGCGGCGCAGTGCCAAAGAGGGGAGAGTTTTCTCTCCATCACTTCAGTGACTCCGGAGCAGTGAAGAGACGTCCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044957 True 274 lncRNA 0.49 2 8835967 8836338

Neighbor

gene id symbol gene type direction distance location
XLOC_022159 NA coding downstream 35212 8799037 ~ 8800755 (-)
XLOC_022158 tcea2 coding downstream 102875 8718950 ~ 8733092 (-)
XLOC_022157 NA coding downstream 462160 8263559 ~ 8373807 (-)
XLOC_022156 NA coding downstream 680912 8018775 ~ 8155055 (-)
XLOC_022155 AL627126.1 coding downstream 864191 7950085 ~ 7971776 (-)
XLOC_022161 CU137717.2 coding upstream 480240 9316578 ~ 9316694 (-)
XLOC_022162 dre-mir-2193 coding upstream 518484 9354822 ~ 9354931 (-)
XLOC_022163 soga1 coding upstream 564087 9400425 ~ 9492266 (-)
XLOC_022164 lama5 coding upstream 730996 9567334 ~ 9768700 (-)
XLOC_022165 mapre1b coding upstream 958392 9794730 ~ 9807578 (-)
XLOC_022154 BX005278.1 non-coding downstream 923744 7912109 ~ 7912223 (-)
XLOC_022167 BX324190.1 non-coding upstream 1016558 9852896 ~ 9853010 (-)
XLOC_022172 NA non-coding upstream 1455830 10292168 ~ 10394444 (-)
XLOC_022173 NA non-coding upstream 1789019 10625357 ~ 10628072 (-)

Expression


Co-expression Network