XLOC_022162 (dre-mir-2193)


Basic Information

Item Value
gene id XLOC_022162
gene name dre-mir-2193
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 9354822 ~ 9354931 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043765
CAAAATCTTCATCCATCATGGGTATGTGTGTATCAATTGTGTGAAAAAATTCTTCACATTTATAAGCATCAAACTTCGATGagtaaagatttttataaaacGCGGCCACG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083706

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043765 True 110 miRNA 0.34 1 9354822 9354931

Neighbor

gene id symbol gene type direction distance location
XLOC_022161 CU137717.2 coding downstream 38128 9316578 ~ 9316694 (-)
XLOC_022160 NA coding downstream 518484 8835967 ~ 8836338 (-)
XLOC_022159 NA coding downstream 554067 8799037 ~ 8800755 (-)
XLOC_022158 tcea2 coding downstream 621730 8718950 ~ 8733092 (-)
XLOC_022157 NA coding downstream 981015 8263559 ~ 8373807 (-)
XLOC_022163 soga1 coding upstream 45494 9400425 ~ 9492266 (-)
XLOC_022164 lama5 coding upstream 212403 9567334 ~ 9768700 (-)
XLOC_022165 mapre1b coding upstream 439799 9794730 ~ 9807578 (-)
XLOC_022166 prkcbp1l coding upstream 454609 9809540 ~ 9864166 (-)
XLOC_022167 BX324190.1 coding upstream 497965 9852896 ~ 9853010 (-)
XLOC_022156 NA non-coding downstream 1199767 8018775 ~ 8155055 (-)
XLOC_022172 NA non-coding upstream 937237 10292168 ~ 10394444 (-)
XLOC_022173 NA non-coding upstream 1270426 10625357 ~ 10628072 (-)
XLOC_022174 NA non-coding upstream 1273221 10628152 ~ 10631424 (-)
XLOC_022179 NA non-coding upstream 1639858 10994789 ~ 10997256 (-)

Expression


Co-expression Network