Gene
RNA
| Item | Value |
|---|---|
| gene id | G276421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55881007 ~ 55881558 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU313819 | True | 380 | lncRNA | 0.59 | 2 | 55881007 | 55881558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520238 | LOC106586370 | coding | downstream | 59765 | 55779503 ~ 55821242 (-) |
| LOC110504309 | plcl1 | coding | downstream | 165222 | 55592364 ~ 55715785 (-) |
| LOC110520233 | NA | coding | downstream | 486004 | 55392189 ~ 55395003 (-) |
| crygs2 | LOC106586348 | coding | downstream | 489675 | 55389101 ~ 55391332 (-) |
| LOC110520232 | LOC106586350 | coding | downstream | 498846 | 55375915 ~ 55382161 (-) |
| LOC110520241 | LOC106586374 | coding | upstream | 8824 | 55890382 ~ 55923883 (-) |
| LOC110520251 | LOC106586357 | coding | upstream | 102315 | 55983873 ~ 55985477 (-) |
| LOC110520250 | LOC106586358 | coding | upstream | 105545 | 55987103 ~ 55988048 (-) |
| LOC110505323 | LOC106586359 | coding | upstream | 116208 | 55997766 ~ 55999561 (-) |
| LOC110520252 | LOC106586360 | coding | upstream | 122274 | 56003832 ~ 56004785 (-) |
| G276458 | NA | non-coding | downstream | 112671 | 55766309 ~ 55768336 (-) |
| G276446 | NA | non-coding | downstream | 141251 | 55739422 ~ 55739756 (-) |
| G276445 | NA | non-coding | downstream | 142419 | 55738370 ~ 55738588 (-) |
| G276443 | NA | non-coding | downstream | 147173 | 55733500 ~ 55733834 (-) |
| G276401 | NA | non-coding | downstream | 158597 | 55722191 ~ 55722410 (-) |
| G276434 | NA | non-coding | upstream | 52278 | 55933836 ~ 55934130 (-) |
| G276420 | NA | non-coding | upstream | 55059 | 55936617 ~ 55937022 (-) |
| G276497 | NA | non-coding | upstream | 61861 | 55943419 ~ 55944159 (-) |
| G276518 | NA | non-coding | upstream | 95902 | 55977460 ~ 55977673 (-) |
| G275250 | NA | other | downstream | 469520 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 761795 | 55068639 ~ 55122013 (-) |
| G274344 | LOC106586294 | other | downstream | 1198202 | 54679918 ~ 54682805 (-) |
| G272713 | LOC106586324 | other | downstream | 2629923 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 3172191 | 52693956 ~ 52708816 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 1389224 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 1521426 | 57402984 ~ 57403575 (-) |
| G277749 | LOC106586429 | other | upstream | 1702828 | 57584386 ~ 57589183 (-) |
| G284018 | NA | other | upstream | 6833017 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 9087991 | 64969549 ~ 64970755 (-) |
