XLOC_022182 (CR388030.1)


Basic Information

Item Value
gene id XLOC_022182
gene name CR388030.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 11532340 ~ 11532470 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043804
ttttacatgtgtatCTAAGTACACAGTGTAACTACAGATGAGTTACAAGCAGGGCTAAaaagctaagcagagctgagcttggtcagtacctggatggaaaaccacatgagaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102238

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043804 True 131 rRNA 0.41 1 11532340 11532470

Neighbor

gene id symbol gene type direction distance location
XLOC_022181 NA coding downstream 186567 11342604 ~ 11345773 (-)
XLOC_022180 cntn3a.2 coding downstream 401657 11014693 ~ 11130683 (-)
XLOC_022179 NA coding downstream 535084 10994789 ~ 10997256 (-)
XLOC_022178 pdzrn3a coding downstream 618065 10828716 ~ 10914275 (-)
XLOC_022177 rybpa coding downstream 745940 10762684 ~ 10786400 (-)
XLOC_022183 CR388030.2 coding upstream 54947 11587417 ~ 11587532 (-)
XLOC_022184 si:dkey-178k16.1 coding upstream 331753 11864223 ~ 12015139 (-)
XLOC_022185 NA coding upstream 484233 12016703 ~ 12020611 (-)
XLOC_022186 AL929345.2 coding upstream 529824 12062294 ~ 12121657 (-)
XLOC_022187 AL929345.1 coding upstream 535650 12068120 ~ 12068234 (-)
XLOC_022174 NA non-coding downstream 900916 10628152 ~ 10631424 (-)
XLOC_022173 NA non-coding downstream 904268 10625357 ~ 10628072 (-)
XLOC_022172 NA non-coding downstream 1137896 10292168 ~ 10394444 (-)
XLOC_022192 NA non-coding upstream 1141858 12674328 ~ 12830279 (-)
XLOC_022193 NA non-coding upstream 1143832 12676302 ~ 12832883 (-)

Expression


Co-expression Network