G283589


Basic Information

Item Value
gene id G283589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62269224 ~ 62271259 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU321614
CAAGAGAAGCATAAATATTTTACAGAAGATAACGGCGGTCTCGTTATTTACAAGATATAATAAATGTCTTGACAACTCACAATAACTGTTTCTGTGTTCTGAGGGctagggagtaacagagagagataggaatggagagagagagatatggagaggacTTAATTACAATCTTTTAACAGTTTAGTTGAGAGGACACTGCACACACCCAAGTGAAAAAGGTTTTCCCCATGACATAGTGGCAGACTACACATACACTGTAGCAGGCTCTTATAGGGGAGAGTGAGGGGAAGGAAGAGACAAATACACAAACATGCTGACAACCAGATAGGCAGTAGTTTTGATAACACACACAAAGAATAGAACTCTTACTAGTTCAAAACGAGAGTACTAGAAAGCTTTTATCCAGCTATGCATTCAAAATTGCATGGAAATTAAATGAGTGACATAAGAGGTCCTCCTAACAGCAATGTATAAGCTCAAGTGTTATCCCCTAGCTTCTGATGAGCTACATTCTGCATAGTGGCCAACTTCCCCCATCGCATCTCCCATTCTCAGAAGCACTCAGTAAAAGCCTCTCCTGTAGGGGCAGATGGAAGAGATTTAAAGGGGAGAGGACTATGACTGACAGCGACATAACTCTCTTTAGCCAAGTGATCCAGGAGAACGAAGCCTAAGGGGAATTAGCTGTACCTTTACAGACAGCAGAAATTCTCCCAAAATGTACCGGTAAATAGATAGGTCTATCACCCTCTCAAAGAAACAAGCAAGGTTGGGGGGGTTGTGCATTATGACTAGAGCTAGGCATTCTGGGagctgaaggagagaggtgggggaagaggAAGTAACTAGGAATCATTGTGAAAACAGAGCGAGTAATAATGGAATAATCTGAAGGAACGCCCCCGTGCCTGATCTGAAAAGCATGTTAATGTGTTGCATTTGAACAGACAATACACACTAGCCATGGCATACATAacaaaacagagagggaggaaagtCGAGATTAGGAGAGCAAAAATTCCCACATTAGTGGTGTGTATGCACATGTGTATTTTGGAGCCTtgccacagagagagaatcagaaCTAACAGAGAAGTTGATGGGCTGTGTTGTATTGGAGTATTCGCTCAGTAGTGAGAGGCTCTTCTTGCTGTTCGAAAGGTTGGGGGTGGGGTGTCGAGGTTTAGGGGGCATGGCTTAGAGTGGCAGCTGGAAGGAGATGTCCACATGAGCCTCCTGAGCCAACGACACAATCTCAGAAAGCTTTACACCATTCTAGCAGCCTCGTCCAGATCGTCACAGGCCAGGAGCTTCAGTGGGCTAGCAGCGATCAAAGCTTTGGCATCGTCCACTCTGGATCCTGAAACACAGCAGAGCAGCAGTCTCTCTTTAGCCTCTATCTTTTCCAAAGCTCTTTGGTTCTCTTTTATAT

Function

NR:

description
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321614 True 1432 lncRNA 0.44 2 62269224 62271259

Neighbor

gene id symbol gene type direction distance location
LOC110520342 itm2b coding downstream 19723 62231915 ~ 62249501 (-)
LOC110520336 lcp1 coding downstream 81137 62180497 ~ 62188087 (-)
LOC110520337 LOC106575914 coding downstream 94061 62164843 ~ 62175163 (-)
LOC118964371 NA coding downstream 103350 62165740 ~ 62165874 (-)
LOC110520331 LOC106586481 coding downstream 139635 62126638 ~ 62129589 (-)
LOC110520347 lrch1 coding upstream 154425 62425684 ~ 62533307 (-)
trnal-caa NA coding upstream 271330 62542589 ~ 62542698 (-)
trnal-caa-2 NA coding upstream 271962 62543221 ~ 62543329 (-)
LOC110520350 LOC106586501 coding upstream 276608 62547867 ~ 62595699 (-)
LOC110520353 LOC106586507 coding upstream 477165 62748424 ~ 62780312 (-)
G283587 NA non-coding downstream 14540 62248247 ~ 62254684 (-)
G283541 LOC106586480 non-coding downstream 117734 62148317 ~ 62151490 (-)
G283398 NA non-coding downstream 364030 61897733 ~ 61905194 (-)
G283373 NA non-coding downstream 419525 61845415 ~ 61849699 (-)
G283282 NA non-coding downstream 570905 61693218 ~ 61698319 (-)
G283697 NA non-coding upstream 141457 62412716 ~ 62413039 (-)
G283899 NA non-coding upstream 207275 62478534 ~ 62480130 (-)
G283973 NA non-coding upstream 343412 62614671 ~ 62621593 (-)
G283974 NA non-coding upstream 352949 62624208 ~ 62624555 (-)
G283989 NA non-coding upstream 380782 62652041 ~ 62652651 (-)
G277749 LOC106586429 other downstream 4680041 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 4865649 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 4971462 57270782 ~ 57297762 (-)
G275250 NA other downstream 6857737 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 7150012 55068639 ~ 55122013 (-)
G284018 NA other upstream 443316 62714575 ~ 62715177 (-)
G286522 NA other upstream 2698290 64969549 ~ 64970755 (-)
G286580 marco other upstream 2743000 65014259 ~ 65029736 (-)
G286638 NA other upstream 2783441 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 2963921 65235180 ~ 65235908 (-)

Expression


Co-expression Network