Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964371 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 62165740 ~ 62165874 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051420.1 | True | 135 | mRNA | 0.44 | 1 | 62165740 | 62165874 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520331 | LOC106586481 | coding | downstream | 36151 | 62126638 ~ 62129589 (-) |
| LOC110520328 | LOC106586479 | coding | downstream | 63617 | 62090263 ~ 62102123 (-) |
| LOC110520327 | LOC106586477 | coding | downstream | 84569 | 61966628 ~ 62081171 (-) |
| il-1rii | il-1rii | coding | downstream | 201726 | 61957371 ~ 61964014 (-) |
| zmp:0000000936 | LOC106586476 | coding | downstream | 209192 | 61919894 ~ 61956548 (-) |
| LOC110520336 | lcp1 | coding | upstream | 14623 | 62180497 ~ 62188087 (-) |
| LOC110520342 | itm2b | coding | upstream | 66041 | 62231915 ~ 62249501 (-) |
| LOC110520347 | lrch1 | coding | upstream | 259810 | 62425684 ~ 62533307 (-) |
| trnal-caa | NA | coding | upstream | 376715 | 62542589 ~ 62542698 (-) |
| trnal-caa-2 | NA | coding | upstream | 377347 | 62543221 ~ 62543329 (-) |
| G283541 | LOC106586480 | non-coding | downstream | 14250 | 62148317 ~ 62151490 (-) |
| G283398 | NA | non-coding | downstream | 260546 | 61897733 ~ 61905194 (-) |
| G283373 | NA | non-coding | downstream | 316041 | 61845415 ~ 61849699 (-) |
| G283282 | NA | non-coding | downstream | 467421 | 61693218 ~ 61698319 (-) |
| G283256 | NA | non-coding | downstream | 476165 | 61653325 ~ 61689575 (-) |
| G283587 | NA | non-coding | upstream | 82373 | 62248247 ~ 62254684 (-) |
| G283589 | NA | non-coding | upstream | 103350 | 62269224 ~ 62271259 (-) |
| G283697 | NA | non-coding | upstream | 246842 | 62412716 ~ 62413039 (-) |
| G283899 | NA | non-coding | upstream | 312660 | 62478534 ~ 62480130 (-) |
| G283973 | NA | non-coding | upstream | 448797 | 62614671 ~ 62621593 (-) |
| G277749 | LOC106586429 | other | downstream | 4576557 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 4762165 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 4867978 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 6754253 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 7046528 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 548701 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 2803675 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 2848385 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 2888826 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 3069306 | 65235180 ~ 65235908 (-) |
