il-1rii (il-1rii)


Basic Information

Item Value
gene id il-1rii
gene name il-1rii
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61957371 ~ 61964014 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124355.1
CTTAACTCTGGTGGTGTGGATTTACTGGAACAGAGCCACTGTCACTACCTCATCACTGTCACCATCATGGTCACCTGGGCAAACTATGCCATGGTTATCCTCAATCTGCTCTCGGCATTGTTCATCGCTCGCTCTGCCTGTGGACTACGACTACCTCCGCTACCTATGatagATGGCTGTTTCAGGGTGTCTCCAGAGCCGGAGGTGTTCCGTGTGCAGGGTGAAGCGGTGGTCCTTAGCTGCGTTGTGTTTGACAGGGTCCTCTACAGACGATTCTCCCAGGCCAAGGCGGGTTACACCTATGTCATCGCCAAGGGAAATGGGACGGAGGGCATTGACCCTGACGAGGGGAAAGAGGGGCGGGTCCTGCAGCGTGAGCGACAGCTGTGGCTCCTCCCAGCTCGAACGTCTGACTCCGGAGCGTACTCCTGCATCTACAGAAATGACACATTATGTGTAATTGGAAGCTTCACTCTACAAGTTTATGAGACCAAGCAAACTGATATTGAGAAGTTGTCTTATCCCATCTCTACACCCGTGGGAAAAAAATTGTCAATCAGATGTCCTCATTTAAAGGACTTCAACAGGACTGACGAAATAGAGTGGTATAAGGACTCCAGCCCGACAGTGCTTCCTGTTGGCAGTGGTCGCTACCAAAGACAGAGACAAGATGTGATCCTCATCTCAGACGTGAGGCCAGCAGACCAGGGCCTCTACACCTGTCAGCTTAGAGTCCACGTCAACAACCTCCAGTACACAGTCAGCAGGACCATTAACCTCAATGTAAAAGTGCCTGACCCAGTTCCCTACATTCAGACCACCAGGCCCATCTTTGACCCAgacacaaccctaacccctaaccctggtcTCAGCACTGTGGAATCCCCAGCAGTTGTGTCCCCCAAGATTGTGTCTCCTGCCAATGGAACAATCTTTGAAAGTCCATTGGGCTCTGTTTTGGAGATATCCTGCCAGGTTTTCACAGGGAGCCAATCAGCGGACGCCACAATGGTCACATGGTTGGTGGACGGCCATTCATTGGATTCGTCCAACCTTGGTGGACGGGCTCTGATGAGTCAGAGGAGGGTAACCACAGTGGCTGGGGGTTGTTATGTTGAGGTGAATCTGTACATCATTGAGCTGTGTGATGAGGATACAAGGGCGGAGCTGAAGTGTGTCACTCAAAACcagggaggaagacaggaggtCATTGCACAGTTCAGAGTCGAAGacCCCAGGTCCACATGGCTGATGGTGGGTGTAGCAGGGTCTGTTTGTTTCCTGACTGTGGTCTCCATCTTCCTTTACCTCCTCCTAAAACCCAGAGGAAAGGCTGACTACTTCCTGGCTCGACAGAACAGCACTTTTAGCTCTACTTTTAGCTCCACATAAACACCTCTCAAGTGATCTCGATGGCtatttttctgttgttttgttaCACAGTGTATACAAAAGTTGACTTACTTTAAACAGAATGTATAcaatgtattattgttattaaacatatttttgaatgaatatcaaaaataaaatatttaattttta

Function

NR:

description
interleukin-1 receptor type 2-like isoform X1

GO: NA

KEGG:

id description
K04387 IL1R2, CD121b; interleukin 1 receptor type II

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124355.1 True 1545 mRNA 0.49 10 61957371 61964014

Neighbor

gene id symbol gene type direction distance location
zmp:0000000936 LOC106586476 coding downstream 823 61919894 ~ 61956548 (-)
il-1r1 il-1r1 coding downstream 40810 61890109 ~ 61916561 (-)
LOC110520322 LOC106586411 coding downstream 184399 61768503 ~ 61772972 (-)
LOC110520320 LOC106586468 coding downstream 228770 61663705 ~ 61728601 (-)
LOC110520317 ndf1 coding downstream 374311 61578579 ~ 61583060 (-)
LOC110520327 LOC106586477 coding upstream 2614 61966628 ~ 62081171 (-)
LOC110520328 LOC106586479 coding upstream 126249 62090263 ~ 62102123 (-)
LOC110520331 LOC106586481 coding upstream 162624 62126638 ~ 62129589 (-)
LOC110520337 LOC106575914 coding upstream 200829 62164843 ~ 62175163 (-)
LOC118964371 NA coding upstream 201726 62165740 ~ 62165874 (-)
G283398 NA non-coding downstream 52177 61897733 ~ 61905194 (-)
G283373 NA non-coding downstream 107672 61845415 ~ 61849699 (-)
G283282 NA non-coding downstream 259052 61693218 ~ 61698319 (-)
G283256 NA non-coding downstream 267796 61653325 ~ 61689575 (-)
G283251 NA non-coding downstream 310092 61643098 ~ 61647279 (-)
G283541 LOC106586480 non-coding upstream 184303 62148317 ~ 62151490 (-)
G283587 NA non-coding upstream 284233 62248247 ~ 62254684 (-)
G283589 NA non-coding upstream 305210 62269224 ~ 62271259 (-)
G283697 NA non-coding upstream 448702 62412716 ~ 62413039 (-)
G283899 NA non-coding upstream 514520 62478534 ~ 62480130 (-)
G277749 LOC106586429 other downstream 4368188 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 4553796 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 4659609 57270782 ~ 57297762 (-)
G275250 NA other downstream 6545884 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 6838159 55068639 ~ 55122013 (-)
G284018 NA other upstream 750561 62714575 ~ 62715177 (-)
G286522 NA other upstream 3005535 64969549 ~ 64970755 (-)
G286580 marco other upstream 3050245 65014259 ~ 65029736 (-)
G286638 NA other upstream 3090686 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 3271166 65235180 ~ 65235908 (-)

Expression


Co-expression Network