G287929


Basic Information

Item Value
gene id G287929
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66232707 ~ 66234021 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU326437
GCTTGAGTGGCTATTTATTTTTGTCCAGTGACCCCCAAAGCAAAGGTAGCCCGTTACATATCCCCAACCCAAGCAACACTTGATAAGTATTGGTAAAATTGGTTACAGATGGACAGCTGTGACTTGTAGATAGCAAAATAGTTGTGAAGAGATGTGCCATTGAATTGGTACATGGTTTGTGAACTGATACACAAGACAACGCTGGATTCAAAACCTTTCAGTTTAActgattatacaaaattcttgcaatcaataaaatgttatatatacacacacacatgtatatggGGTATAGAAcaatcccagctctgcagattttgctgcttttggtactgtccatatgtagcttgtttttggtcgcaggttcaaGAATGGCTGaataattgcaacatttacctggggctaactctgcaaatagcactgctaggtgatttaaaaagtcatagtcaatcgatcaataacaATTATACTCATAACAAAAATGTTTCTTTAATTTACAATATGTAGaatctatgagaatagaaaggttctgaaaaacaaacaaaagataactattgtaaactATACTGTGTCTgtgaaaatatatacagtacgtACATATAAGacggaactagaagcataagtcttgttgtccattagtttactccaatttggggaggggtggtagggttaggagaAAATATATAAGAaaattgtggaataatagtgaagatatcaaaactatgaaatcatgtagtaacccaaaaacaccatttgccttgatgactgccttagagtgtgcaaagctttctctcaaccagattcacctggaatgattttccaaaagtcttgaaggagttcccacatatgctgagcacttgttggctgcttttccttcactctgcagtccaacttgggttgaggtcgggtgattgtgaaggcgagatcatctgatgcagcaccatcactctccttcttggtcaaatagcccttacagagcctggaggtgtgttttgggtcattgtcctgttgaaaaacaaatgatagtgggactaagtgcaaaccagatgggatggcgtatcgctgcaatatgctgtggtagccatgctggttaactgtgccttgaattctaaataaatcacagacagtgtcaccagcaaagcacccccacacctactcctccatgcttcacggtgggaaccacacatgcagagatcttccgttcacctactctgcttctcacaaagacacgggtttggaaccaaaaataacttatcctctgcagcagaggtaactatgggtcttcctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326437 True 1288 lncRNA 0.40 2 66232707 66234021

Neighbor

gene id symbol gene type direction distance location
LOC110520425 LOC106582038 coding downstream 39220 66183116 ~ 66193487 (-)
rnf17 rnf17 coding downstream 162573 66036342 ~ 66070134 (-)
ttf2 ttf2 coding downstream 205106 66020033 ~ 66027601 (-)
LOC110520422 vtcn1 coding downstream 248582 65978825 ~ 65984444 (-)
LOC110520420 trim45 coding downstream 253998 65973480 ~ 65978709 (-)
LOC110520429 LOC106586615 coding upstream 34164 66268185 ~ 66295887 (-)
LOC118964314 NA coding upstream 166046 66400067 ~ 66412373 (-)
LOC118944607 LOC106582097 coding upstream 238318 66472339 ~ 66475059 (-)
LOC110520431 LOC106586619 coding upstream 256447 66490468 ~ 66537895 (-)
LOC110504514 NA coding upstream 498216 66732237 ~ 66747293 (-)
G287853 NA non-coding downstream 124273 66107872 ~ 66108434 (-)
G287706 NA non-coding downstream 144150 66088305 ~ 66088557 (-)
G287697 NA non-coding downstream 157289 66075183 ~ 66075418 (-)
G287693 NA non-coding downstream 163347 66069137 ~ 66069360 (-)
G287666 NA non-coding downstream 232518 65997968 ~ 66000189 (-)
G287951 NA non-coding upstream 44359 66278380 ~ 66278703 (-)
G287953 NA non-coding upstream 46549 66280570 ~ 66280905 (-)
G287954 NA non-coding upstream 47592 66281613 ~ 66281866 (-)
G287956 NA non-coding upstream 49771 66283792 ~ 66284069 (-)
G287962 NA non-coding upstream 60204 66294225 ~ 66294475 (-)
G287112 NA other downstream 652212 65579791 ~ 65580495 (-)
G287042 NA other downstream 785424 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 932290 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 996799 65235180 ~ 65235908 (-)
G286638 NA other downstream 1156722 65054700 ~ 65075985 (-)
G288578 NA other upstream 608650 66842671 ~ 66842881 (-)
G289678 NA other upstream 1392811 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1649731 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1972569 68206330 ~ 68208674 (-)
G290542 NA other upstream 2345082 68579103 ~ 68580707 (-)

Expression


Co-expression Network