G292430



Basic Information


Item Value
gene id G292430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70603181 ~ 70603557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU331634
gaccaaaatgcagcgtggttattttgatacatgtttaataaacgACTAaccacgaacaatacaaaaacgtaacccgaaaacctaaacagcctatctggtgcaaactaacacagagacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaacgataaacacctgcctctgattgagaaccacttcaggcaaccatagactttcctagaaaaccccactataccacaatccaaatacctacaaaaaacccaagataaaacacaccacataataaacccatgtcacaccctggcctgaccaaaataataaagaaaacacaaaatactaagaccagggcgtgacactcagCCAGCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU331634 True 377 lncRNA 0.41 1 70603181 70603557

Neighbor


gene id symbol gene type direction distance location
LOC110520507 senp7 coding upstream 5723 70576887 ~ 70597458 (+)
LOC118964320 NA coding upstream 38526 70555484 ~ 70564655 (+)
LOC110520506 LOC106586710 coding upstream 48000 70550269 ~ 70555181 (+)
LOC110520505 LOC106586712 coding upstream 63424 70463764 ~ 70539757 (+)
LOC110518747 LOC106586693 coding upstream 289181 70231555 ~ 70314000 (+)
LOC110504631 LOC106582154 coding downstream 8594 70612151 ~ 70655881 (+)
LOC110520508 abi3bp coding downstream 107574 70711131 ~ 70769507 (+)
LOC110520514 dcbld2 coding downstream 305800 70909357 ~ 70944650 (+)
LOC110520513 LOC106586698 coding downstream 358622 70962179 ~ 71002292 (+)
il1rapl1a LOC106586724 coding downstream 676492 71280049 ~ 71706686 (+)
G292427 NA non-coding upstream 16288 70586319 ~ 70586893 (+)
G292415 NA non-coding upstream 33431 70569515 ~ 70569750 (+)
G292414 NA non-coding upstream 33926 70569044 ~ 70569255 (+)
G292504 NA non-coding downstream 161890 70765447 ~ 70784159 (+)
G292505 NA non-coding downstream 162402 70765959 ~ 70766317 (+)
G292433 tfg non-coding downstream 166385 70769942 ~ 70838658 (+)
G292574 cmss1 non-coding downstream 351482 70955039 ~ 71009493 (+)
LOC110520493 LOC106586690 other upstream 532824 70057383 ~ 70070470 (+)
G291461 NA other upstream 651013 69949667 ~ 69952168 (+)
LOC110504602 LOC106586683 other upstream 681062 69915810 ~ 69923807 (+)
LOC110520485 dynlt3 other upstream 732969 69861894 ~ 69870212 (+)
G293204 NA other downstream 762626 71366183 ~ 71366423 (+)
G293450 NA other downstream 1134248 71737805 ~ 71738175 (+)
LOC110520522 LOC106586718 other downstream 1364191 71947367 ~ 71975611 (+)
G294147 NA other downstream 1645403 72248960 ~ 72249987 (+)

Expression



Co-expression Network