XLOC_022453 (CR456642.2)


Basic Information

Item Value
gene id XLOC_022453
gene name CR456642.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 30517199 ~ 30698687 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044283
GGAGGGGAAATGGCTGCCGAAAACAAGCCGGAAGGACTGAAGAAAATCCGTAATCCGGATCGAATGTACAGATCAGCTGTGTGTTATTCGGCCCATGCTCCTCCTAAGAGTGTCAGTGATGACACAGAGACGAACAATGAACATGGACATTTGAAAATATACCTGCCCAAAAAGCTGCTTGAATGTCTACCAAAATGCTCCACGTTGCCAAAGGAGAGACACAGGTGGAACACCAATGAGGTAAGGGCTTGCAGGACATGGAAACGGGCACAGAGAGTTAATTAGGCAAGAAGGTAAGGTGGCCATGATGGGCAAACCCCATACATACACCTCCAGCTGCTCtaacgctcacacacacacacatacacacagctaaTGGGAACGATACTTGACCTTCAGAGCTGGCAAACACTACCTATGCTGGCCAACCAGCAAGTTTTATGTCCATggtacactcaaacacacactcttattttttatttttttgagggcTAGAATAATATCTAGAATtgtttgtacagtatatacattgtaaaataaatctgtaaatcagctgttttaattgatttatttatcttttatgcttttgaattgcattatgggatctttctTCTGAGAacctttaaccttaaaa
>TCONS_00044285
atgtggCGCGCGGAGGGGAAATGGCTGCCGAAAACAAGCCGGAAGGTAAGTCAGAAACATCGGGGATATTTTTTACTTGTACGGCAAGAGTATGAACATGGACATTTGAAAATATACCTGCCCAAAAAGCTGCTTGAATGTCTACCAAAATGCTCCACGTTGCCAAAGGAGAGACACAGGTGGAACACCAATGAGGTAAGAAGTTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092307

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044283 False 634 processed_transcript 0.42 4 30517199 30698676
TCONS_00044285 True 207 processed_transcript 0.46 3 30658642 30698687

Neighbor

gene id symbol gene type direction distance location
XLOC_022452 camta1a coding downstream 85866 30061364 ~ 30431333 (-)
XLOC_022451 NA coding downstream 458023 30054434 ~ 30059176 (-)
XLOC_022450 ccdc187 coding downstream 471466 30013240 ~ 30045733 (-)
XLOC_022449 NA coding downstream 506380 30009263 ~ 30010819 (-)
XLOC_022448 CU695073.1 coding downstream 615964 29900651 ~ 29901235 (-)
XLOC_022455 thap3 coding upstream 27029 30725716 ~ 30727596 (-)
XLOC_022456 pcmtd2a coding upstream 57117 30755804 ~ 30764319 (-)
XLOC_022457 myt1a coding upstream 68623 30767310 ~ 30787932 (-)
XLOC_022458 NA coding upstream 207737 30906424 ~ 30921011 (-)
XLOC_022459 osbpl2a coding upstream 239070 30937757 ~ 30960506 (-)
XLOC_022446 FP101914.1 non-coding downstream 672885 29841211 ~ 29844314 (-)
XLOC_022443 NA non-coding downstream 694634 29821201 ~ 29822565 (-)
XLOC_022461 NA non-coding upstream 554613 31253300 ~ 31266621 (-)
XLOC_022466 NA non-coding upstream 722124 31420811 ~ 31423522 (-)
XLOC_022472 BX927365.1 non-coding upstream 994681 31693368 ~ 31717710 (-)
XLOC_022474 BX927365.2 non-coding upstream 1056065 31754752 ~ 31754868 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location