XLOC_022522 (fam110c)


Basic Information

Item Value
gene id XLOC_022522
gene name fam110c
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 35486037 ~ 35491587 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044420
GTTGGGGTTCATACTGTATTTGTATTATATGTCCTGTAATAAAGATGTAAAAACCTTACCACCAGCTTCCACTTACTTAATTCTTTCTGCTTATTAAATATTGCAAAACTCCATCCTATTTTGAAAACGTTATAGTTGATGTTTCCTGAAAGTCTTCCTCATCTTTTCCCAGACATCTCTTATGTCAGAGCTCGCATTGTCTTGACCTGTTGGTGGGTGGAGTAGGTGAGTATGAACAGGTAAATGTGTGTGCGTCAGTGCTGTGCATGCTTGCTCATCTACCGGACCCCTAAACACATTGAGCAACACAGCCGTTGTGGATTTAGCACGCAGGACTCACCTGCTTATACGAGGAAAATGTTGAAGAAAACGCAGGGATCGTTCGAGGTGGACCCGTCACGCATTCTTGTGAAGGGACCGGAGTTTTTAAGGAAACAGATGGAGAGAGAAAACGAGGCGAATAAAGGACGCGTCAGTGCGGTGGAGAGGCTGGCAGCCACTAAACCACAGTATGTAAAATGCCAACAAGAGGTCGGTTCCTCTCAGGAACCGGTTATCAGCACCGAGTCTGCCTCTGGGAGCAGTCGAGGGTCTTCAAAGGAAGACGATTCCGTAAAAAACACTGTTAATGTTGATTATAAAGAGTTACCCGAAGAAGATAGCAACGTGGTGAGACGGAGCAGCTCGAAGAAACGTGACTCGATTCTGTTATACAGAcagaagtgtgaactcttgagagGAGCACCTGTACTGAGAAGGAGACTCAACAGAAAGCCGTTACTTACCGTTAGAGACAAAGGTGGAGAATCTGATCGCGCCACAAGTAAGGAATGTGGAAAAGAGTCCTCACAGGTAACCATAACCGCAAGCGGGACAAATGAGGTTCAGAGAGCGACTCCTCACAGGAAAGTTCTTGAAACAAAAGAGCAGGAGCGCAAGAGTCGCACAGGAGTGGCGCGCTCCAGCTCGGACATCAGCTCGCGCTACTCGAAAAACTTCGCGGACTTCGACGTGTTCTTCAAATATTGCGGGCTCGACGGTGACATCATCGAGTCGCTGGGCAAAGAGAATTTCTCCGCGCGCTCGGACGATCTCAGCTCCAATATCAGGAGCATCAGCGTGTCCACGTCGGATGACGGGTTCTCGAGCTGCAGCGACGGTTTGCAAGAGGAGGAATTGCAGGAGACTGTCCGACAAGGGTCGTCAGTGATCGAGCGCAACGCTCGGATTATCAAGTGGCTTTACAGCTGCAGAAATGCAGCAGAGTCTGGAAAGACTCTTCGAGATCTGGATTAAATTATGTCCTGTAACAAATTACTTTGTTTTGACTACTATTATCAAAAGCATCTCTACAGTTTCAAGAAAGAGTTGTTGGAGACACCGGCACattattagccaatcagaaaattAGGCACTAAACCCACTCTTCTGGACTGTTCTAGGGCATACTACTGGGTCAATTTTAGTAGGTCTAtactgtttgttgttgttgttgtttgtgagcaTGTAAAATAAGATCTCTGGTTAACATTttgctttcatttattcattttcttctcggcttagtcccttaattaatccggggtcgctacagcagaatgaaccgccaacttatttagcacgtttcatgcagcggatgcccttccagctgcaacccatttctgggaaacatccatacacacccattcacacacatacactacggacaatttagccaattcacctgtaccacgtctttggactgtctgggaaagcggagcacccgagGGAAACCCATGcgtatgcagggagaacatgcaaacttaacatagaaatgccaactgacccagccgaggctcgaaccagagacctttttgctgtgaggcgacagcactacctactgcgcactGCATCGCCCATTTTGCTTTACTTACTTTACAAATTTTTGTACTTCACATCTAGGCGGACGTTCAAGTTCAAAACTGTGTTTTTGGGTGAAGTCTAGAttggatacagctgtggatactccaatccagtgtttctcaaactgtggcatgtgtaccactagtggtccCACTAGTCATATGCGGAGTGATcactgaataattaaaaaataataattaaaaaatttatcaaaaagagtTTATATATGAATTTGAAATAGCCTATATTAATGAGGTCACAGAACTTTTCCAGGTTTTGATAAATAGgctacagcagttttctttttactttttaagaacagtgtctattttaattaacttttaaaagcacattttaattcaaacGTGACTTATTTTTTACTTGTAGGCTCAATGcaatgttaatgttcaaactatttctaatgtttaaagtggctgacaataatacattttcaaaatattaggAATAAATCTGCCTTGTTTTTAAACTGTGTAGAGCTTtggctgcttaattaggcctactgctactgtattttaatactttttattatgGTGGTACTGCTtctgtattttaatactttttattatggtggtacttggaaagacaattgttttctgaggtggtacttggtgaaaaaagtttgagaaccactgctccaATCAatatagcctaattttgttgACACTATACAACAATAATTGCTGTTATTACATTACTGTGGCGGTTCGTTTTaaggttggggtagacgttaaaatacagttaaatggctaatttcataaataatttgAATACTTGGTATAATTGCTGTCACAACTGTGATGGCTTtggtgggtttagggttggggtagaggtagacgttaataaaatacatttaatagataatatttttaataaataatcaaaataattctCATTGTAACTTCTAGCCGCAGCTGTATCTCCTCTAGCTGCAACCAATGTTTTGCTATGGAAGCAACTTGTGGTATTAAAGAGACATAATGGGTTCAAGTAAAGTTGCTTCTCTTAAATTTTGGACAACTTGAGCAGATACTGTAACAATGCGCATATTTTTCAgtattaaacacatatttataCCGATTTCATCaggctctgttttttttttaaaagatcacAAGAATGGCCTGCTCAGCTGCCATAAAGTTGCAACTCTTGTGTCATCAGAACAAGATGTTCGACCACCACCTTTTCCATTTCAAAGAACATTTTGCAACATTTTGAACGGAGCCCAGAATTTTGAAGATAGTTTAACATTTTCTATGTTGattattgtgtttaatttaaacctGAAGAAGTGCCAGCTAGAAACGTATGGCTTTTATATTATCCTCTAAAGATGCAGCATTTTGATTGTACCACTTCTACTTCCTCGGCATGTGAAAACCCATTTTTATTACTCTTTAGGTCAAGAAAATGTTTACGTTTTATCATATTTCCTACTTTCTTCAAATGGCATCCTTATTCTGGGTGCAAGTGGTAAACACACGTCCCCTTCACATTTCACAAAGGCCACTTCAGCACGACAGGCttgtttatacatttacatgcTGTGTGATATCAGCATAAGAAGCAGAAATCTAGCCATGATGATGACTGATAAAGAATAACGGCTTACATGACTGCATTGTAGACATAGTAAAGATATTGGATTAAGTACTTGCACTCATAGTTTTTCAGAagtataagtgaagtttatgtataaacaatattcgagaggatcatgtgcttatgattgctagcggctggatccgcattacccaattcactacgctccaatctctcctaaactactataaataacctgggtttcattccactgctatcttcgttttgaagagtccccccttcctcccctactcctccttcttagacgggtgacacggtggcccagtgcgtagcactgtcacctcacagcaagaatgtctctggttcctgacTTTACCAAACtacagacatttctgtgtggagtttgcacttctccccgtgctcacgtgagtttcccccgggttccctggtttcctcccaccgcctaaaaacttgcaattaagtcaattgaacaatccaaattggcaccataggcACGCATCTAGTAGTTATTTTCAAGAACaatcacttgctacagcaggggagttctcgagatctacctgagctcaaactcccctcccgccttgcaacgggagggagccctgggctcgaggatctcatgagctcaggactctctcccgggacagcatgccaaacaagcttttataattaatcatcagctaagtgtgaactcttgaaactgtaGTGTTCGTCAAGCATGTACACATCCTTTTGGTGGTATAGTACTCTTTATTTATAGCACAGTTTGCGTAATGTATGTTGAcatgaacatttattaaaaaaatactaactttagGCTTTATTTTACTCGTAAATCCAAAACCACCATTTAAAAAAACCCTATGGGAAAGTCCAGAGGGATCCCGAAGCTCAGTTTTTAGGGCCTTAAAGTGCTGTATTGTTACAAGCCACTTTTCGATAAGCCTTTTCGTCATGCCAGTACTTGATCCTGGAAAGTATTCTATTATATCTACTGAGAGATATCGTGTTACTTGATTTATACTGTATTAACAGTCAGTTATACAGCCCTTCCTGCATTTTAGTTCTctgttaaatgtaaaaactggCTTTGCACAGTTTACAGAGACAATTGTTGGCTTTAAACCATCATACAACCCTGCCAGCTTTGGATTGCAGAGGTGGCCTATAAATAGGGCTTCAGATTTGCAGTTTTGTCTATTGTTGGGTAACAACGGAAATGGTGAACAAAAAACAAGGACATTCACACCCAGCGTGGGTGTGTATAAATTGTGCCATTGTCACTTCAGTTCAAAGATAAGTGTCTGTTTATCCTGACTGACTGTTATCTGTACCTTCCTCACTCACTGTACATTGAAAGGGTGTTTGATTACTTCATCAGACTGCCTGACATAgtgtgtaaaatattaatttttcatttttttaaacttttccaGAGCAGTTACTGTTATAAGACTGTTTTTGATTTAGCTTTGCTGACTTAAAAGcagatattattttatatacaatactttcatattttataatgaaaatataCAGGTTTTACAAATGTTAACTTAGTGTGTGTGTTCATAATTTTGCACATGACTGAATTTTTGGCAAGTTCTTTAACCAATCTGTGCAGTGTTTTCACATGCACACGAAAACTTACCCCTCTGGCCTCTTAAATGCAGACTGCAGGGCAGGTTAGATCTTGCAGAGGGAGTGTTTGTGGCCTTTACACTACTTTAAATGATTTTGGACATGCATTCTTTCCTGAATGCATGctagaatgattttttttacatttaagcttaTACTTACTGTACATCTGTGATGTTTTCTGACACCTTACAAGGCAGATTTATTGTTAACTTTCTATATGTAGAATTCAGAAACTGTTATTACAGTGTTTTTAATGTAACATTCACTTTGATGGTTGTGTCTCAATGCTTGCCATTTTCTATTGGCAAGTATTCTGCAGCTCAGTTTAGACTTTCATCTGGGTGGGGTTTTACCTGACACAAATATGTGTCAGATGTCAAATAAAGAAACTGTAAAAAGGTCA

Function

symbol description
fam110c Orthologous to human FAM110C (family with sequence similarity 110 member C).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-63 Orthologous to human FAM110C (family with sequence similarity 110 member C).

Ensembl:

ensembl_id ENSDARG00000096989

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044420 True 5551 mRNA 0.40 1 35486037 35491587

Neighbor

gene id symbol gene type direction distance location
XLOC_022521 fbxo25 coding downstream 2727 35468834 ~ 35483310 (-)
XLOC_022520 cmtr1 coding downstream 89059 35361724 ~ 35396978 (-)
XLOC_022519 cpne9 coding downstream 138299 35244378 ~ 35347738 (-)
XLOC_022518 NA coding downstream 282953 35200692 ~ 35203084 (-)
XLOC_022517 klf15 coding downstream 290129 35187683 ~ 35195908 (-)
XLOC_022523 NA coding upstream 48773 35540360 ~ 35549662 (-)
XLOC_022524 tmem18 coding upstream 150474 35642061 ~ 35649000 (-)
XLOC_022525 NA coding upstream 172265 35663852 ~ 35669221 (-)
XLOC_022526 tuba1c coding upstream 199070 35690657 ~ 35694461 (-)
XLOC_022527 jph2 coding upstream 230020 35721607 ~ 35756115 (-)
XLOC_022515 NA non-coding downstream 717886 34767321 ~ 34768151 (-)
XLOC_022513 CT025912.1 non-coding downstream 1517049 33968866 ~ 33968988 (-)
XLOC_022509 NA non-coding downstream 1746926 33731189 ~ 33739111 (-)
XLOC_022506 NA non-coding downstream 1867191 33608009 ~ 33618846 (-)
XLOC_022530 BX546466.1 non-coding upstream 373139 35864726 ~ 35864853 (-)
XLOC_022532 NA non-coding upstream 529209 36020796 ~ 36051826 (-)
XLOC_022533 BX005254.3 non-coding upstream 589838 36081425 ~ 36088234 (-)

Expression


Co-expression Network