G338569


Basic Information

Item Value
gene id G338569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 27954159 ~ 27954413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU383202
gtgttggagaagaaagtaaaagtgcaatatttgccatgtaagaaagctaacgtttaagttccttgctcagaacatgagaacatatgaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagacgttttaggttgtagttattataggaattataggactatttccctctataccatttgtatttcattaacctttgactattggatgttcttataggcactttcgtattgccagtgtaacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU383202 True 255 lncRNA 0.35 1 27954159 27954413

Neighbor

gene id symbol gene type direction distance location
LOC118964460 NA coding upstream 81181 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 189607 27757433 ~ 27764552 (+)
opn8b LOC106608041 coding upstream 289740 27624700 ~ 27664419 (+)
LOC118964415 LOC106608050 coding upstream 352595 27537262 ~ 27601564 (+)
LOC110522432 otof coding upstream 429771 27402097 ~ 27524388 (+)
LOC110522445 LOC106608054 coding downstream 603787 28558200 ~ 28567300 (+)
LOC110522446 bmp2 coding downstream 675591 28630004 ~ 28636513 (+)
LOC110521072 plcb1 coding downstream 744654 28699067 ~ 28934753 (+)
LOC110522448 plcb4 coding downstream 1003671 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 1199061 29153474 ~ 29163882 (+)
G338568 NA non-coding upstream 172 27953688 ~ 27953987 (+)
G338567 NA non-coding upstream 613 27953046 ~ 27953546 (+)
G338555 NA non-coding upstream 28165 27925780 ~ 27925994 (+)
G338537 NA non-coding upstream 69850 27883900 ~ 27884309 (+)
G338533 NA non-coding upstream 87705 27866227 ~ 27866454 (+)
G338570 NA non-coding downstream 3040 27957453 ~ 27958749 (+)
LOC110522440 atad2b non-coding downstream 6948 27800923 ~ 27962367 (+)
G338504 NA non-coding downstream 8300 27962713 ~ 27964402 (+)
G338564 klhl29 non-coding downstream 56506 28010919 ~ 28035031 (+)
G338605 NA non-coding downstream 58611 28013024 ~ 28040623 (+)
LOC110522355 plekhg1 other upstream 769189 27054628 ~ 27185449 (+)
G336464 NA other upstream 1059322 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 1896468 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 3531428 24420114 ~ 24422731 (+)
G339660 NA other downstream 904303 28858716 ~ 28859155 (+)
G339693 NA other downstream 960186 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 1212105 29166518 ~ 29166996 (+)
G339928 NA other downstream 1380956 29335369 ~ 29336939 (+)
G342538 NA other downstream 3427413 31381826 ~ 31382749 (+)

Expression


Co-expression Network