G339592


Basic Information

Item Value
gene id G339592
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28714211 ~ 28714439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384328
CTAAATTAAAATTTCAGGTGCACTGCAAAATATTTAGGCGCATGTGTGAATAGAATGGTGTCCCTGTAGAGCCCTGTCAACCCAACCAGACCTAATCCACACACCGCAGAATCACAtgcacaaacacccacacacacacacacacaacaccaggCCAAAAGTTAAGAGTCATCACTCATCACCGATATTGTGTGACAGAGGATTAACATCACACTCACCTCAGTACGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384328 True 229 lncRNA 0.45 1 28714211 28714439

Neighbor

gene id symbol gene type direction distance location
LOC110522446 bmp2 coding upstream 77698 28630004 ~ 28636513 (+)
LOC110522445 LOC106608054 coding upstream 146911 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 751844 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 841233 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 949659 27757433 ~ 27764552 (+)
LOC110522448 plcb4 coding downstream 243645 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 439035 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 460887 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 468440 29182879 ~ 29186037 (+)
LOC110522451 LOC106608077 coding downstream 625097 29339536 ~ 29348164 (+)
G339591 NA non-coding upstream 106 28713901 ~ 28714105 (+)
G339590 NA non-coding upstream 597 28712963 ~ 28713614 (+)
G339583 NA non-coding upstream 9217 28704131 ~ 28704994 (+)
G339562 NA non-coding upstream 57659 28656192 ~ 28656552 (+)
G339376 NA non-coding upstream 141444 28571319 ~ 28572767 (+)
G339594 NA non-coding downstream 2203 28716642 ~ 28717062 (+)
G339597 NA non-coding downstream 9500 28723939 ~ 28724145 (+)
G339598 NA non-coding downstream 10511 28724950 ~ 28725162 (+)
G339600 NA non-coding downstream 13809 28728248 ~ 28728448 (+)
G339601 NA non-coding downstream 16999 28731438 ~ 28731771 (+)
LOC118964415 LOC106608050 other upstream 1112655 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1529241 27054628 ~ 27185449 (+)
G336464 NA other upstream 1819374 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 2656520 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 4291480 24420114 ~ 24422731 (+)
G339660 NA other downstream 144277 28858716 ~ 28859155 (+)
G339693 NA other downstream 200160 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 452079 29166518 ~ 29166996 (+)
G339928 NA other downstream 620930 29335369 ~ 29336939 (+)
G342538 NA other downstream 2667387 31381826 ~ 31382749 (+)

Expression


Co-expression Network