G339609


Basic Information

Item Value
gene id G339609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 28767753 ~ 28767986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU384349
gtacaatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacttatttGCACACAGAAATACCCCCAGATTAGTCAGATCTGCCAGAATGGCATAgggaatagtatagaatagaatagttatTGTCTTGTCATCTTTACAAAGCAAATTCCTTTGCTATGCTCCAACCCCCTTGACACATAAACAGACAACATATAAACAAGCACTACTTCAAACGAGGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384349 True 234 lncRNA 0.41 1 28767753 28767986

Neighbor

gene id symbol gene type direction distance location
LOC110522446 bmp2 coding upstream 131240 28630004 ~ 28636513 (+)
LOC110522445 LOC106608054 coding upstream 200453 28558200 ~ 28567300 (+)
LOC110522440 atad2b coding upstream 805386 27800923 ~ 27962367 (+)
LOC118964460 NA coding upstream 894775 27871143 ~ 27872978 (+)
LOC110522435 wdcp coding upstream 1003201 27757433 ~ 27764552 (+)
LOC110522448 plcb4 coding downstream 190098 28958084 ~ 29140138 (+)
LOC110522450 LOC106608065 coding downstream 385488 29153474 ~ 29163882 (+)
LOC118964462 NA coding downstream 407340 29174963 ~ 29176894 (+)
LOC118964461 NA coding downstream 414893 29182879 ~ 29186037 (+)
LOC110522451 LOC106608077 coding downstream 571550 29339536 ~ 29348164 (+)
G339608 NA non-coding upstream 341 28767192 ~ 28767412 (+)
G339605 NA non-coding upstream 1467 28749896 ~ 28766286 (+)
G339601 NA non-coding upstream 35982 28731438 ~ 28731771 (+)
G339600 NA non-coding upstream 39305 28728248 ~ 28728448 (+)
G339598 NA non-coding upstream 42591 28724950 ~ 28725162 (+)
G339612 NA non-coding downstream 3354 28771340 ~ 28771630 (+)
G339614 NA non-coding downstream 4203 28772189 ~ 28772469 (+)
G339615 NA non-coding downstream 4799 28772785 ~ 28773101 (+)
G339649 NA non-coding downstream 65153 28833139 ~ 28833405 (+)
G339662 NA non-coding downstream 91958 28859944 ~ 28861067 (+)
LOC118964415 LOC106608050 other upstream 1166197 27537262 ~ 27601564 (+)
LOC110522355 plekhg1 other upstream 1582783 27054628 ~ 27185449 (+)
G336464 NA other upstream 1872916 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 2710062 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 4345022 24420114 ~ 24422731 (+)
G339660 NA other downstream 90730 28858716 ~ 28859155 (+)
G339693 NA other downstream 146613 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 398532 29166518 ~ 29166996 (+)
G339928 NA other downstream 567383 29335369 ~ 29336939 (+)
G342538 NA other downstream 2613840 31381826 ~ 31382749 (+)

Expression


Co-expression Network