G342538


Basic Information

Item Value
gene id G342538
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 31381826 ~ 31382749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU387608
ACTAAGAaagctctcaaccaactctataaggccataaaaaaagaagaaaatgctcacccagaagcagtgctcctagtggccagggactttaatgcaggtaaacttaaatcagttttaccatttttttttaccagcatgtcacatgtgcatcCAGAGGAAAataaatcctagaccacctttactccacaaacagagatgcatacaaagctctcccccgccctccactTGGcgaatctgaccacaattctatcctcctgatccctgcttacaagcaaaaactaaagcaggaagtaccagtgactcactcaatacggaagtggtcagatgacgcagatgctatactacaggactgttttgctagcacagactggaatatgttccaggattcatccaatggcattgaggaatacaccacctcagtcatcggcttcatcaataagtgcatcgatgacgtcgtgcCCACAGTGACcttacatacatatcccaaccagaagccatggattacaggcaacatccacatcgagctaaaggcaAGAGCtgtcactttcaaggagcgggagactaatccggatgcttataagaaatcccgctctgccctcagacaaaccatcaaacaagcaaagcgtcaatacagtgTAAAAAAATTAATCACACTCGTCAgatatggcagggcttgaaaactattacggactacaaagggaaacccagatgtgagctgcccagtgacgcgagcctaccagatgagctaaatgccttttatgctagcttcgaggcaagcaacactgaagcatgcacgagagcaccagctgatcTGGAccactgtgtgataacgctctcggtagccgatgtgaacaaaacctttaaaccggctagacggattaccaggacgtgtacacaaagcatgcgcggaccaactgtaaagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU387608 True 924 TUCP 0.46 1 31381826 31382749

Neighbor

gene id symbol gene type direction distance location
ppp2r5cb LOC106608134 coding upstream 154462 31187226 ~ 31227364 (+)
LOC110522488 hs90a coding upstream 199114 31169651 ~ 31182712 (+)
LOC110522477 mgat2 coding upstream 558767 30816416 ~ 30823059 (+)
LOC110522479 NA coding upstream 584139 30796219 ~ 30797687 (+)
LOC110522472 rs30 coding upstream 1424268 29952461 ~ 29957558 (+)
slc25a29 LOC106608124 coding downstream 9430 31392179 ~ 31401929 (+)
LOC110522495 NA coding downstream 26539 31408651 ~ 31412134 (+)
LOC110522493 LOC106608104 coding downstream 35717 31417955 ~ 31422086 (+)
LOC110521075 NA coding downstream 40068 31422817 ~ 31455326 (+)
LOC118964493 NA coding downstream 73265 31456014 ~ 31459259 (+)
G342537 NA non-coding upstream 457 31380954 ~ 31381369 (+)
G342535 NA non-coding upstream 3620 31377960 ~ 31378206 (+)
G342534 NA non-coding upstream 4272 31377194 ~ 31377554 (+)
G342533 NA non-coding upstream 4678 31376892 ~ 31377148 (+)
G342532 NA non-coding upstream 8224 31373398 ~ 31373602 (+)
G342539 NA non-coding downstream 2215 31384964 ~ 31385470 (+)
G342540 NA non-coding downstream 2795 31385544 ~ 31385801 (+)
G342515 NA non-coding downstream 22291 31405040 ~ 31407262 (+)
G339928 NA other upstream 2044887 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 2214830 29166518 ~ 29166996 (+)
G339693 NA other upstream 2466287 28914599 ~ 28915539 (+)
G339660 NA other upstream 2522671 28858716 ~ 28859155 (+)
LOC118964415 LOC106608050 other upstream 3780270 27537262 ~ 27601564 (+)
G342571 NA other downstream 68384 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 403116 31785865 ~ 31786206 (+)
G343958 NA other downstream 1312237 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 2089303 33469529 ~ 33489784 (+)

Expression


Co-expression Network