G342570


Basic Information

Item Value
gene id G342570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 31450616 ~ 31450904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU387644
AAAAGAGGAACAGAAGTATGTTGCTTCTCTCTCGGTTGAACTGTTTTAGAAAAAAAGGAAAAGGAAACCTAACCAAACATGGTTGCAGGTGATGCAGAGAGGATACCCTGTTGCCATAGCAACATGCAGGTGCAGGTGCAGCTAATCTCGTGTTCAATCTGTGGAGATAAAACATGTTATGCACGTAGTGGTGTTAACAGCGTTTCacatgtgcatgcacacacacacacaacatgtacacacacactcaatacaGCCCCCACACACACCAGACCTGAAGAGAGACTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU387644 True 289 lncRNA 0.45 1 31450616 31450904

Neighbor

gene id symbol gene type direction distance location
LOC110522493 LOC106608104 coding upstream 28559 31417955 ~ 31422086 (+)
LOC110522495 NA coding upstream 38482 31408651 ~ 31412134 (+)
slc25a29 LOC106608124 coding upstream 48687 31392179 ~ 31401929 (+)
ppp2r5cb LOC106608134 coding upstream 223252 31187226 ~ 31227364 (+)
LOC110522488 hs90a coding upstream 267904 31169651 ~ 31182712 (+)
LOC118964493 NA coding downstream 5110 31456014 ~ 31459259 (+)
LOC110522497 sn25a coding downstream 19244 31470148 ~ 31505600 (+)
LOC110521077 LOC106608119 coding downstream 156961 31607865 ~ 31623080 (+)
LOC110521078 LOC106608118 coding downstream 181764 31632668 ~ 31749603 (+)
LOC118964494 NA coding downstream 352842 31803746 ~ 31808383 (+)
G342564 NA non-coding upstream 13131 31437258 ~ 31437485 (+)
LOC110521075 NA non-coding upstream 18301 31422817 ~ 31455326 (+)
G342515 NA non-coding upstream 43354 31405040 ~ 31407262 (+)
G342574 NA non-coding downstream 8782 31459686 ~ 31459901 (+)
G342576 NA non-coding downstream 12173 31463077 ~ 31463954 (+)
G342593 NA non-coding downstream 46838 31497742 ~ 31500511 (+)
G342595 NA non-coding downstream 52179 31503083 ~ 31503616 (+)
G342596 NA non-coding downstream 54862 31505766 ~ 31505975 (+)
G342538 NA other upstream 67867 31381826 ~ 31382749 (+)
G339928 NA other upstream 2113677 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 2283620 29166518 ~ 29166996 (+)
G339693 NA other upstream 2535077 28914599 ~ 28915539 (+)
G342571 NA other downstream 229 31451133 ~ 31451476 (+)
G342707 LOC106608120 other downstream 334961 31785865 ~ 31786206 (+)
G343958 NA other downstream 1244082 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 2021148 33469529 ~ 33489784 (+)
G344647 NA other downstream 2101223 33552127 ~ 33554003 (+)

Expression


Co-expression Network