G342618


Basic Information

Item Value
gene id G342618
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 31541112 ~ 31541541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU387714
agagagagacacagagagagagagagagagagagagacacagagagagagacacagagagagagacacagagagagacacagagagagagagagagagagagagagagagagagagagagacacagagacacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaagagagagagagacagagacacagagagagagagacacagagagagacacagcgagagagagtcaGATTGGGTAAACTGATGTTTTGAAGCCATTTGATTTAATCTACCATTTGAATCAATCTACCACAAGCTACTAGGTCGTTGAACCAATTAGGTGCCTTTTCAGTTGTGTAACTCATAAAAAGagtttgaataaaaaaaaaacatttccccaTCTCAAAAAATAAAGTAACGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU387714 True 430 lncRNA 0.43 1 31541112 31541541

Neighbor

gene id symbol gene type direction distance location
LOC110522497 sn25a coding upstream 35512 31470148 ~ 31505600 (+)
LOC118964493 NA coding upstream 81853 31456014 ~ 31459259 (+)
LOC110521075 NA coding upstream 85786 31422817 ~ 31455326 (+)
LOC110522493 LOC106608104 coding upstream 119055 31417955 ~ 31422086 (+)
LOC110522495 NA coding upstream 128978 31408651 ~ 31412134 (+)
LOC110521077 LOC106608119 coding downstream 66324 31607865 ~ 31623080 (+)
LOC110521078 LOC106608118 coding downstream 91127 31632668 ~ 31749603 (+)
LOC118964494 NA coding downstream 262205 31803746 ~ 31808383 (+)
LOC110522501 LOC106571602 coding downstream 439054 31980595 ~ 32015870 (+)
tdrd6 tdrd6 coding downstream 486499 32028040 ~ 32052842 (+)
G342615 NA non-coding upstream 2266 31535960 ~ 31538846 (+)
G342613 NA non-coding upstream 12689 31527960 ~ 31528423 (+)
G342599 NA non-coding upstream 31542 31509272 ~ 31509570 (+)
G342598 NA non-coding upstream 32375 31508508 ~ 31508737 (+)
G342596 NA non-coding upstream 35137 31505766 ~ 31505975 (+)
G342619 NA non-coding downstream 659 31542200 ~ 31542900 (+)
G342621 NA non-coding downstream 5672 31547213 ~ 31547487 (+)
G342622 NA non-coding downstream 8953 31550494 ~ 31551081 (+)
G342623 NA non-coding downstream 9821 31551362 ~ 31551576 (+)
G342624 NA non-coding downstream 10749 31552290 ~ 31552577 (+)
G342571 NA other upstream 89636 31451133 ~ 31451476 (+)
G342538 NA other upstream 158363 31381826 ~ 31382749 (+)
G339928 NA other upstream 2204173 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 2374116 29166518 ~ 29166996 (+)
G342707 LOC106608120 other downstream 244324 31785865 ~ 31786206 (+)
G343958 NA other downstream 1153445 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1930511 33469529 ~ 33489784 (+)
G344647 NA other downstream 2010586 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 2043437 33584945 ~ 33586386 (+)

Expression


Co-expression Network