G342690


Basic Information

Item Value
gene id G342690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 31753179 ~ 31753490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU387818
ACTACACCTCACCCACACTACTACACATCACCCATACCACTAACATCAACCACACATCACCCACAGTTGTTCATTTGAATTTTAAATCTCCACTTTACATAAAGCCAGCAGTTATAATACATTCAGGccctttacatttctatcacagaattgaatagagccctttgaCTTGTCTTAAACTAAAGAAAAGGTGTAGTGGCTTCATTCCATATACAGCATCTCTCTATTTGATTGAAATCATCTTTGCCAAATGAATACTACCAGTAATCATGCAAGTCATTAGAAAAACATTGATGTTCATGACAGTTATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU387818 True 312 lncRNA 0.36 1 31753179 31753490

Neighbor

gene id symbol gene type direction distance location
LOC110521078 LOC106608118 coding upstream 3576 31632668 ~ 31749603 (+)
LOC110521077 LOC106608119 coding upstream 130099 31607865 ~ 31623080 (+)
LOC110522497 sn25a coding upstream 247579 31470148 ~ 31505600 (+)
LOC118964493 NA coding upstream 293920 31456014 ~ 31459259 (+)
LOC110521075 NA coding upstream 297853 31422817 ~ 31455326 (+)
LOC118964494 NA coding downstream 50256 31803746 ~ 31808383 (+)
LOC110522501 LOC106571602 coding downstream 227105 31980595 ~ 32015870 (+)
tdrd6 tdrd6 coding downstream 274550 32028040 ~ 32052842 (+)
LOC110521080 ints9 coding downstream 319271 32072761 ~ 32082328 (+)
LOC118964510 NA coding downstream 338670 32092160 ~ 32092446 (+)
G342689 NA non-coding upstream 12398 31740355 ~ 31740781 (+)
G342687 NA non-coding upstream 16226 31736360 ~ 31736953 (+)
G342682 NA non-coding upstream 40376 31711632 ~ 31712803 (+)
G342624 NA non-coding upstream 200602 31552290 ~ 31552577 (+)
G342691 NA non-coding downstream 51 31753541 ~ 31753762 (+)
G342693 NA non-coding downstream 5347 31758837 ~ 31762818 (+)
G342695 NA non-coding downstream 11233 31764723 ~ 31764954 (+)
G342697 NA non-coding downstream 12304 31765794 ~ 31766044 (+)
G342698 LOC106608120 non-coding downstream 12817 31766307 ~ 31766665 (+)
G342571 NA other upstream 301703 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 333923 31417955 ~ 31422086 (+)
G342538 NA other upstream 370430 31381826 ~ 31382749 (+)
G339928 NA other upstream 2416240 29335369 ~ 29336939 (+)
G339830 LOC100846954 other upstream 2586183 29166518 ~ 29166996 (+)
G342707 LOC106608120 other downstream 32375 31785865 ~ 31786206 (+)
G343958 NA other downstream 941496 32694986 ~ 32704371 (+)
LOC110521085 LOC100380634 other downstream 1718562 33469529 ~ 33489784 (+)
G344647 NA other downstream 1798637 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 1831488 33584945 ~ 33586386 (+)

Expression


Co-expression Network