Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964781 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 14396810 ~ 14396945 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051974.1 | True | 136 | mRNA | 0.41 | 1 | 14396810 | 14396945 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523259 | odf2 | coding | upstream | 29270 | 14351453 ~ 14367540 (+) |
| LOC110523258 | LOC106570496 | coding | upstream | 49398 | 14345633 ~ 14347412 (+) |
| mmp11b | LOC106570480 | coding | upstream | 88091 | 14272305 ~ 14308719 (+) |
| LOC110523253 | LOC106570436 | coding | upstream | 167502 | 14148432 ~ 14231585 (+) |
| LOC110523252 | LOC106570453 | coding | upstream | 254344 | 14128559 ~ 14142466 (+) |
| uap1l1 | uap1l1 | coding | downstream | 41171 | 14438116 ~ 14447360 (+) |
| LOC110523268 | LOC106570653 | coding | downstream | 148624 | 14545569 ~ 14547879 (+) |
| fam102ab | LOC106569988 | coding | downstream | 150998 | 14547943 ~ 14630069 (+) |
| LOC110523269 | LOC106569993 | coding | downstream | 245828 | 14642773 ~ 14672009 (+) |
| dpm2 | NA | coding | downstream | 281175 | 14678120 ~ 14684431 (+) |
| G370458 | NA | non-coding | upstream | 26579 | 14369995 ~ 14370231 (+) |
| G370457 | NA | non-coding | upstream | 27072 | 14369502 ~ 14369738 (+) |
| G370403 | NA | non-coding | upstream | 27325 | 14369009 ~ 14369485 (+) |
| G370455 | NA | non-coding | upstream | 45668 | 14350840 ~ 14351142 (+) |
| G370428 | NA | non-coding | upstream | 51260 | 14344984 ~ 14345550 (+) |
| G370472 | NA | non-coding | downstream | 4894 | 14401839 ~ 14402147 (+) |
| G370407 | wdr34 | non-coding | downstream | 33902 | 14430847 ~ 14431069 (+) |
| G370476 | NA | non-coding | downstream | 35082 | 14432027 ~ 14432389 (+) |
| G370406 | wdr34 | non-coding | downstream | 35704 | 14432649 ~ 14432907 (+) |
| G370413 | NA | non-coding | downstream | 36487 | 14433432 ~ 14433707 (+) |
| G370414 | NA | other | upstream | 28649 | 14367672 ~ 14368161 (+) |
| G370382 | smarcb1 | other | upstream | 70915 | 14321104 ~ 14325895 (+) |
| G370360 | NA | other | upstream | 137677 | 14255803 ~ 14259133 (+) |
| G369763 | NA | other | upstream | 627514 | 13765247 ~ 13769296 (+) |
| G368440 | NA | other | upstream | 1287676 | 13108696 ~ 13109134 (+) |
| LOC118964542 | LOC106569496 | other | downstream | 407716 | 14798616 ~ 14805526 (+) |
| LOC110519479 | LOC106596183 | other | downstream | 651233 | 15047739 ~ 15054353 (+) |
| G371182 | NA | other | downstream | 727345 | 15124290 ~ 15128817 (+) |
| G371615 | LOC100194725 | other | downstream | 1394614 | 15791559 ~ 15795122 (+) |
| G372281 | LOC106569177 | other | downstream | 1822661 | 16218328 ~ 16220933 (+) |
