Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523414 |
| gene name | cetn3 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21633532 ~ 21635979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cetn3 | Predicted to enable calcium ion binding activity and microtubule binding activity. Predicted to be active in microtubule organizing center. Orthologous to human CETN3 (centrin 3). |
| description |
|---|
| centrin-3 |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K16466 | CETN3, CDC31; centrin-3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602091.2 | True | 1251 | mRNA | 0.42 | 5 | 21633532 | 21635979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523413 | LOC106568345 | coding | upstream | 10594 | 21616200 ~ 21622938 (+) |
| LOC110523412 | LOC106568387 | coding | upstream | 24451 | 21602033 ~ 21609081 (+) |
| LOC110523411 | LOC106568349 | coding | upstream | 36090 | 21578990 ~ 21597442 (+) |
| LOC110523408 | LOC106565015 | coding | upstream | 99371 | 21527555 ~ 21534161 (+) |
| LOC110523409 | LOC106565015 | coding | upstream | 111704 | 21518557 ~ 21521828 (+) |
| LOC110523415 | LOC106568324 | coding | downstream | 33442 | 21669421 ~ 21684268 (+) |
| LOC110522823 | NA | coding | downstream | 53189 | 21689168 ~ 21695622 (+) |
| LOC110523419 | LOC106568313 | coding | downstream | 129726 | 21765705 ~ 21769900 (+) |
| LOC110523420 | LOC106568307 | coding | downstream | 162361 | 21798340 ~ 21808924 (+) |
| LOC110523421 | LOC106568255 | coding | downstream | 180799 | 21816778 ~ 21822877 (+) |
| G377535 | NA | non-coding | upstream | 17739 | 21615078 ~ 21615793 (+) |
| G377533 | NA | non-coding | upstream | 21151 | 21612119 ~ 21612381 (+) |
| G377527 | NA | non-coding | upstream | 41827 | 21589495 ~ 21591705 (+) |
| G377523 | NA | non-coding | upstream | 55948 | 21577204 ~ 21577584 (+) |
| G377520 | NA | non-coding | upstream | 61260 | 21571209 ~ 21572272 (+) |
| G377619 | NA | non-coding | downstream | 144409 | 21780388 ~ 21780616 (+) |
| G377628 | NA | non-coding | downstream | 154602 | 21790581 ~ 21790798 (+) |
| G377629 | NA | non-coding | downstream | 154899 | 21790878 ~ 21791428 (+) |
| G377630 | NA | non-coding | downstream | 155523 | 21791502 ~ 21791809 (+) |
| LOC110523400 | LOC106568542 | other | upstream | 474613 | 21108129 ~ 21160149 (+) |
| LOC110522817 | LOC106568462 | other | upstream | 796973 | 20831111 ~ 20842676 (+) |
| LOC110522816 | LOC106568602 | other | upstream | 875031 | 20508074 ~ 20759255 (+) |
| G377022 | NA | other | upstream | 1036669 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 1649684 | 19983261 ~ 19983848 (+) |
| G378660 | NA | other | downstream | 536556 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 867773 | 22503752 ~ 22506270 (+) |
| G378868 | NA | other | downstream | 966131 | 22602110 ~ 22629669 (+) |
| lhfpl2a | lhfpl2 | other | downstream | 1306313 | 22942205 ~ 23007315 (+) |
| LOC110522832 | LOC106567816 | other | downstream | 1987985 | 23623921 ~ 23678038 (+) |
