LOC100136696 (LOC100136696)


Basic Information

Item Value
gene id LOC100136696
gene name LOC100136696
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72041148 ~ 72053264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976502.1
ATCCAGGTCTTATTTTGTGATGATTAAAAAAACGTCACTGTGTTTGCTCGGCAATAAAGGCTGTGATGAGCTCTTCccttttgacacacacacacacacaaccctcaccTGCCGACACTCAACACAAAGttccATCATGGTGCGTACAGTAGCAGTGATTGGGGCGGGTCCCTCAGGTCTGACCAGCATCAAGAGCTGTCTGGACGAGGGTCTGGAGCCCACCTGCTTCGAGAGCAGTGATGACATCGGGGGGCTGTGGAAGTTCAAGGAAGTTTCTGAGCCCAACAGAGCCAGTATCTACCGTTCCCTCACCATCAATATCTCCAAGGAGATGATGTGTTTCAGCGACTTCCCCATCCCAGCTGACTACCCCAACTACATGCACCACTCCCGTATCCTGCAGTACTTCAGGCTCTATGCTGAACACTTCAAACTGCTGCAGCACATCCACTTCCAGACCAGTGTGCGGAGTGTGAGACAGAGGCCAGACTTCAGTCATTCAGGCCAGTGGGAGGTGGTGACAGAGaacagggagggacaggaggagagacacatgTTTGACTCTGTCATCGTCTGCTCTGGTCACTACTCCTACCCACACCTTCCACTTAAAGACTTCTCAGGTATTGAGTCGTTTGAGGGGAAGTACTTCCACAGTTGGGATTATAAGGGTCCAGAGGACCTTCGTGGGAAGAGGGTGGTGGTGATCGGCATCGGCAACTCTGGAGGAGACATCGCTGTGGAGTCCAGCCGGGTGGCCGAGCAGGTGTATCTGAGCACGCGTCGCGGTGCGTGGGTTATACGTGTGATGTCGGACAACGGCTTGCCCGTGGACATGAAGTATAACACACGCTTTGTCCACATCCTGTTCCAACTGCTGCCAGTTAACTGGCTCAGCTGGTTCGGAGAGAAGAAGCTCAACGCCATGTATGACCACACCATGTACGCCCTCAAACCCAaacacagGTTGTTCAGTACGATTCCAGTGATAAATGATGAGCTTCCCAATAAGATCTTGACTGGTGGAGTCATGGTCAAACCCAATGTCCAACAGATCAGAGGCTCCAGTGTGGTGTTTGAGGATGGGAGTGTGGTGGACAAGGTGGATGTGATTGTGTTCGCTACGGGTTACAACTACGACTTTCCCTTCCTGCCTCCCAACGTAATGCATAAGTCTGGCCACCGGTTGGGGCTGTACAAGCATGTGTTTCCCCCCACCCTGGAGCACCCCACCATGGCCGTAGTAGGCTTCATCCATGCCCTGGGTGCCATCATGCCCCAGGCAGAGATGCAGTCCCGCTGGGTCACACGTGTCTTTAAAGGTCATAAGAAGCTACCGTCCAACCGGGCCATGCTGAAGGCTGTGGAGTGCGACACCAAGGACATGGACAAGAACTACATCGTATCCAAGCTGGTGCCGCTGCAGGTGGACTTTGTGTCCTACATGGATGACATCGCTGGAGAGGTGGGGGTCAGACCCAGCCTGGCCTGGCTGTTCTTCACTGACTACCCCCTATTCAAGAGGGTTCTGTGGGGTCCCGTCACTGCCTACCAATACCGTATCACCGGCCCAGGGAAATGGTCCGGGGCACGCAGAGCCATCTTCACCCAGTTTGAACGCATGTTCCAGCCCTTCAAGACCAGACAGGTGGAGGAGAAGCAGGGATGTTCTGTGGCGGGCCGTCTGCTAAAGCTCAGCCTCACAGCGATGGTGGGAGGAGCAGCAGCCTACTACTTCCACCTCCAaccaccctcctccctcacctACCTTCTCTCCAAACTCACACCTCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGTCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGTCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACCACCCTCTTTTCATCCTaaaccacctctctcctctcttttctgaacaccaccctcctctcctctcctcatgtgATCTTCATGATTGTCAGAGCCATTCCTCTGCTGTGAAGTATATTATTAAATATTGGAACTGGA
>XM_036976503.1
GTTTGCTCGGCAATAAAGGCTGTGATGAGCTCTTCccttttgacacacacacacacacaaccctcaccTGCCGACACTCAACACAAAGacatttctaagtgaccccaaacgtttgaatggtAGTGCttccATCATGGTGCGTACAGTAGCAGTGATTGGGGCGGGTCCCTCAGGTCTGACCAGCATCAAGAGCTGTCTGGACGAGGGTCTGGAGCCCACCTGCTTCGAGAGCAGTGATGACATCGGGGGGCTGTGGAAGTTCAAGGAAGTTTCTGAGCCCAACAGAGCCAGTATCTACCGTTCCCTCACCATCAATATCTCCAAGGAGATGATGTGTTTCAGCGACTTCCCCATCCCAGCTGACTACCCCAACTACATGCACCACTCCCGTATCCTGCAGTACTTCAGGCTCTATGCTGAACACTTCAAACTGCTGCAGCACATCCACTTCCAGACCAGTGTGCGGAGTGTGAGACAGAGGCCAGACTTCAGTCATTCAGGCCAGTGGGAGGTGGTGACAGAGaacagggagggacaggaggagagacacatgTTTGACTCTGTCATCGTCTGCTCTGGTCACTACTCCTACCCACACCTTCCACTTAAAGACTTCTCAGGTATTGAGTCGTTTGAGGGGAAGTACTTCCACAGTTGGGATTATAAGGGTCCAGAGGACCTTCGTGGGAAGAGGGTGGTGGTGATCGGCATCGGCAACTCTGGAGGAGACATCGCTGTGGAGTCCAGCCGGGTGGCCGAGCAGGTGTATCTGAGCACGCGTCGCGGTGCGTGGGTTATACGTGTGATGTCGGACAACGGCTTGCCCGTGGACATGAAGTATAACACACGCTTTGTCCACATCCTGTTCCAACTGCTGCCAGTTAACTGGCTCAGCTGGTTCGGAGAGAAGAAGCTCAACGCCATGTATGACCACACCATGTACGCCCTCAAACCCAaacacagGTTGTTCAGTACGATTCCAGTGATAAATGATGAGCTTCCCAATAAGATCTTGACTGGTGGAGTCATGGTCAAACCCAATGTCCAACAGATCAGAGGCTCCAGTGTGGTGTTTGAGGATGGGAGTGTGGTGGACAAGGTGGATGTGATTGTGTTCGCTACGGGTTACAACTACGACTTTCCCTTCCTGCCTCCCAACGTAATGCATAAGTCTGGCCACCGGTTGGGGCTGTACAAGCATGTGTTTCCCCCCACCCTGGAGCACCCCACCATGGCCGTAGTAGGCTTCATCCATGCCCTGGGTGCCATCATGCCCCAGGCAGAGATGCAGTCCCGCTGGGTCACACGTGTCTTTAAAGGTCATAAGAAGCTACCGTCCAACCGGGCCATGCTGAAGGCTGTGGAGTGCGACACCAAGGACATGGACAAGAACTACATCGTATCCAAGCTGGTGCCGCTGCAGGTGGACTTTGTGTCCTACATGGATGACATCGCTGGAGAGGTGGGGGTCAGACCCAGCCTGGCCTGGCTGTTCTTCACTGACTACCCCCTATTCAAGAGGGTTCTGTGGGGTCCCGTCACTGCCTACCAATACCGTATCACCGGCCCAGGGAAATGGTCCGGGGCACGCAGAGCCATCTTCACCCAGTTTGAACGCATGTTCCAGCCCTTCAAGACCAGACAGGTGGAGGAGAAGCAGGGATGTTCTGTGGCGGGCCGTCTGCTAAAGCTCAGCCTCACAGCGATGGTGGGAGGAGCAGCAGCCTACTACTTCCACCTCCAaccaccctcctccctcacctACCTTCTCTCCAAACTCACACCTCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGTCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGTCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACCACCCTCTTTTCATCCTaaaccacctctctcctctcttttctgaacaccaccctcctctcctctcctcatgtgATCTTCATGATTGTCAGAGCCATTCCTCTGCTGTGAAGTATATTATTAAATATTGGAACTGGA
>XM_036976504.1
AAAGGCTGTGATGAGCTCTTCccttttgacacacacacacacacaaccctcaccTGCCGACACTCAACACAAAGacatttctaagtgaccccaaacgtttgaatgttccATCATGGTGCGTACAGTAGCAGTGATTGGGGCGGGTCCCTCAGGTCTGACCAGCATCAAGAGCTGTCTGGACGAGGGTCTGGAGCCCACCTGCTTCGAGAGCAGTGATGACATCGGGGGGCTGTGGAAGTTCAAGGAAGTTTCTGAGCCCAACAGAGCCAGTATCTACCGTTCCCTCACCATCAATATCTCCAAGGAGATGATGTGTTTCAGCGACTTCCCCATCCCAGCTGACTACCCCAACTACATGCACCACTCCCGTATCCTGCAGTACTTCAGGCTCTATGCTGAACACTTCAAACTGCTGCAGCACATCCACTTCCAGACCAGTGTGCGGAGTGTGAGACAGAGGCCAGACTTCAGTCATTCAGGCCAGTGGGAGGTGGTGACAGAGaacagggagggacaggaggagagacacatgTTTGACTCTGTCATCGTCTGCTCTGGTCACTACTCCTACCCACACCTTCCACTTAAAGACTTCTCAGGTATTGAGTCGTTTGAGGGGAAGTACTTCCACAGTTGGGATTATAAGGGTCCAGAGGACCTTCGTGGGAAGAGGGTGGTGGTGATCGGCATCGGCAACTCTGGAGGAGACATCGCTGTGGAGTCCAGCCGGGTGGCCGAGCAGGTGTATCTGAGCACGCGTCGCGGTGCGTGGGTTATACGTGTGATGTCGGACAACGGCTTGCCCGTGGACATGAAGTATAACACACGCTTTGTCCACATCCTGTTCCAACTGCTGCCAGTTAACTGGCTCAGCTGGTTCGGAGAGAAGAAGCTCAACGCCATGTATGACCACACCATGTACGCCCTCAAACCCAaacacagGTTGTTCAGTACGATTCCAGTGATAAATGATGAGCTTCCCAATAAGATCTTGACTGGTGGAGTCATGGTCAAACCCAATGTCCAACAGATCAGAGGCTCCAGTGTGGTGTTTGAGGATGGGAGTGTGGTGGACAAGGTGGATGTGATTGTGTTCGCTACGGGTTACAACTACGACTTTCCCTTCCTGCCTCCCAACGTAATGCATAAGTCTGGCCACCGGTTGGGGCTGTACAAGCATGTGTTTCCCCCCACCCTGGAGCACCCCACCATGGCCGTAGTAGGCTTCATCCATGCCCTGGGTGCCATCATGCCCCAGGCAGAGATGCAGTCCCGCTGGGTCACACGTGTCTTTAAAGGTCATAAGAAGCTACCGTCCAACCGGGCCATGCTGAAGGCTGTGGAGTGCGACACCAAGGACATGGACAAGAACTACATCGTATCCAAGCTGGTGCCGCTGCAGGTGGACTTTGTGTCCTACATGGATGACATCGCTGGAGAGGTGGGGGTCAGACCCAGCCTGGCCTGGCTGTTCTTCACTGACTACCCCCTATTCAAGAGGGTTCTGTGGGGTCCCGTCACTGCCTACCAATACCGTATCACCGGCCCAGGGAAATGGTCCGGGGCACGCAGAGCCATCTTCACCCAGTTTGAACGCATGTTCCAGCCCTTCAAGACCAGACAGGTGGAGGAGAAGCAGGGATGTTCTGTGGCGGGCCGTCTGCTAAAGCTCAGCCTCACAGCGATGGTGGGAGGAGCAGCAGCCTACTACTTCCACCTCCAaccaccctcctccctcacctACCTTCTCTCCAAACTCACACCTCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGTCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGTCTGAACACcatcttcctccacctccctcctctccaccctcaacCCCCAGAGAGCCTGAACACCACCCTCTTTTCATCCTaaaccacctctctcctctcttttctgaacaccaccctcctctcctctcctcatgtgATCTTCATGATTGTCAGAGCCATTCCTCTGCTGTGAAGTATATTATTAAATATTGGAACTGGA
>NM_001124664.1
agttccATCATGGTGCGTACAGTAGCAGTGATTGGGGCGGGTCCCTCAGGTCTGACCAGCATCAAGAGCTGTCTGGACGAGGGTCTGGAGCCCACCTGCTTCGAGAGCAGTGATGACATCGGGGGGCTGTGGAAGTTCAAGGAAGTTTCTGAGCCCAACAGAGCCAGTATCTACCGTTCCCTCACCATCAATATCTCCAAGGAGATGATGTGTTTCAGCGACTTCCCCATCCCAGCTGACTACCCCAACTACATGCACCACTCCCGTATCCTGCAGTACTTCAGGCTCTATGCTGAACACTTCAAACTGCTGCAGCACATCCACTTCCAGACCAGTGTGCGGAGTGTGAGACAGAGGCCAGACTTCAGTCATTCAGGCCAGTGGGAGGTGGTGACAGAGaacagggagggacaggaggagagacacatgTTTGACTCTGTCATCGTCTGCTCTGGTCACTACTCCTACCCACACCTTCCACTTAAAGACTTCTCAGGTATTGAGTCGTTTGAGGGGAAGTACTTCCACAGTTGGGATTATAAGGGTCCAGAGGACCTTCGTGGGAAGAGGGTGGTGGTGATCGGCATCGGCAACTCTGGAGGAGACATCGCTGTGGAGTCCAGCCGGGTGGCCGAGCAGGTGTATCTGAGCACGCGTCGCGGTGCGTGGGTTATACGTGTGATGTCGGACAACGGCTTGCCCGTGGACATGAAGTATAACACACGCTTTGTCCACATCCTGTTCCAACTGCTGCCAGTTAACTGGCTCAGCTGGTTCGGAGAGAAGAAGCTCAACGCCATGTATGACCACACCATGTACGCCCTCAAACCCAaacacagGTTGTTCAGTACGATTCCAGTGATAAATGATGAGCTTCCCAATAAGATCTTGACTGGTGGAGTCATGGTCAAACCCAATGTCCAACAGATCAGAGGCTCCAGTGTGGTGTTTGAGGATGGGAGTGTGGTGGACAAGGTGGATGTGATTGTGTTCGCTACGGGTTACAACTACGACTTTCCCTTCCTGCCTCCCAACGTAATGCATAAGTCTGGCCACCGGTTGGGGCTGTACAAGCATGTGTTTCCCCCCACCCTGGAGCACCCCACCATGGCCGTAGTAGGCTTCATCCATGCCCTGGGTGCCATCATGCCCCAGGCAGAGATGCAGTCCCGCTGGGTCACACGTGTCTTTAAAGGTCATAAGAAGCTACCGTCCAACCGGGCCATGCTGAAGGCTGTGGAGTGCGACACCAAGGACATGGACAAGAACTACATCGTATCCAAGCTGGTGCCGCTGCAGGTGGACTTTGTGTCCTACATGGATGACATCGCTGGAGAGGTGGGGGTCAGACCCAGCCTGGCCTGGCTGTTCTTCACTGACTACCCCCTATTCAAGAGGGTTCTGTGGGGTCCCGTCACTGCCTACCAATACCGTATCACCGGCCCAGGGAAATGGTCCGGGGCACGCAGAGCCATCTTCACCCAGTTTGAACGCATGTTCCAGCCCTTCAAGACCAGACAGGTGGAGGAGAAGCAGGGATGTTCTGTGGCGGGCCGTCTGCTAAAGCTCAGCCTCACAGCGATGGTGGGAGGAGCAGCAGCCTACTACTTCCACCTCCAaccaccctcctccctcacctACCTTCTCTCCAAACTCACACCTCAGAGAGtctgaacaccaccctcctctcctctcctcatgtgATCTTCATGATTGTCAGAGCCATTCCTCTGCTGTGAAGTATATTATTAAATATTGGAACTG

Function

NR:

description
flavin-containing monooxygenase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0004499 N,N-dimethylaniline monooxygenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0050661 NADP binding molecular_function

KEGG:

id description
K00485 FMO; dimethylaniline monooxygenase (N-oxide forming)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976502.1 False 2265 mRNA 0.54 11 72041148 72053264
XM_036976503.1 False 2262 mRNA 0.55 12 72041189 72053264
XM_036976504.1 False 2241 mRNA 0.55 12 72041203 72053264
NM_001124664.1 True 1764 mRNA 0.54 11 72048462 72053262

Neighbor

gene id symbol gene type direction distance location
LOC110522995 LOC106613964 coding upstream 7045 72033129 ~ 72034103 (+)
fam20b LOC106613959 coding upstream 331398 71695892 ~ 71709750 (+)
ralgps2 LOC106613957 coding upstream 353970 71552653 ~ 71687963 (+)
LOC110524493 ca163 coding upstream 496686 71542762 ~ 71544462 (+)
echdc2 LOC106584286 coding upstream 509183 71517672 ~ 71531972 (+)
LOC110524501 LOC106613965 coding downstream 15605 72068869 ~ 72097126 (+)
LOC110524502 LOC106613967 coding downstream 45494 72098758 ~ 72134274 (+)
LOC110524503 LOC106613969 coding downstream 83022 72136286 ~ 72167442 (+)
LOC110524504 vamp4 coding downstream 121853 72175117 ~ 72209661 (+)
myoc LOC106613972 coding downstream 166633 72219897 ~ 72228181 (+)
G435801 NA non-coding upstream 35558 72002883 ~ 72005590 (+)
G435716 NA non-coding upstream 192145 71848450 ~ 71849003 (+)
G435626 NA non-coding upstream 314154 71726686 ~ 71726994 (+)
G435621 NA non-coding upstream 316409 71723463 ~ 71724739 (+)
G435024 NA non-coding upstream 329735 71710376 ~ 71711413 (+)
G436015 NA non-coding downstream 117907 72171171 ~ 72171409 (+)
G436018 NA non-coding downstream 156581 72209845 ~ 72211677 (+)
G436017 NA non-coding downstream 159131 72212395 ~ 72216387 (+)
G436049 NA non-coding downstream 203665 72256929 ~ 72260707 (+)
G436059 NA non-coding downstream 226930 72280194 ~ 72284469 (+)
G434829 NA other upstream 742248 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 817570 71218789 ~ 71223578 (+)
G434653 NA other upstream 1081216 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 3827044 68212224 ~ 68214236 (+)
G436403 NA other downstream 450196 72503460 ~ 72504435 (+)
G436588 NA other downstream 942235 72995499 ~ 72995735 (+)
G437327 NA other downstream 1403037 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2709940 74729349 ~ 74770168 (+)
G438719 NA other downstream 2718745 74772009 ~ 74776469 (+)

Expression


Co-expression Network