G435626


Basic Information

Item Value
gene id G435626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71726686 ~ 71726994 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU493226
aagcaaagcagtgcgacaaaaataacaacgcagagttacacaaacaaacgtacagtcaataacacaatagaaaaatctatgtacagtgtgtgcaaatgtagaagagtagggaggtaaggcaataaataggccctagaggctaaaataattacaatttagcattaatactggagtgatagatgtgcagatgatgatgtgcaagtagagatactggggtgcaaaagagcaagagggtaagtaataatatgggggtGAGGTAGTCGGGTGtactatttacagattggctgtgtacagatATCAACCACAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU493226 True 309 lncRNA 0.39 1 71726686 71726994

Neighbor

gene id symbol gene type direction distance location
fam20b LOC106613959 coding upstream 16936 71695892 ~ 71709750 (+)
ralgps2 LOC106613957 coding upstream 39508 71552653 ~ 71687963 (+)
LOC110524493 ca163 coding upstream 182224 71542762 ~ 71544462 (+)
echdc2 LOC106584286 coding upstream 194721 71517672 ~ 71531972 (+)
LOC110524491 LOC106614023 coding upstream 210383 71507467 ~ 71516303 (+)
LOC110522995 LOC106613964 coding downstream 306135 72033129 ~ 72034103 (+)
LOC100136696 LOC100136696 coding downstream 314154 72041148 ~ 72053264 (+)
LOC110524501 LOC106613965 coding downstream 341875 72068869 ~ 72097126 (+)
LOC110524502 LOC106613967 coding downstream 371764 72098758 ~ 72134274 (+)
LOC110524503 LOC106613969 coding downstream 409292 72136286 ~ 72167442 (+)
G435621 NA non-coding upstream 1947 71723463 ~ 71724739 (+)
G435024 NA non-coding upstream 15273 71710376 ~ 71711413 (+)
G435049 NA non-coding upstream 20276 71704031 ~ 71706410 (+)
G434991 NA non-coding upstream 38198 71688184 ~ 71688488 (+)
G435716 NA non-coding downstream 121456 71848450 ~ 71849003 (+)
G435801 NA non-coding downstream 275889 72002883 ~ 72005590 (+)
G436015 NA non-coding downstream 444177 72171171 ~ 72171409 (+)
G436018 NA non-coding downstream 482851 72209845 ~ 72211677 (+)
G436017 NA non-coding downstream 485401 72212395 ~ 72216387 (+)
G434829 NA other upstream 427786 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 503108 71218789 ~ 71223578 (+)
G434653 NA other upstream 766754 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 3512582 68212224 ~ 68214236 (+)
G436403 NA other downstream 776466 72503460 ~ 72504435 (+)
G436588 NA other downstream 1268505 72995499 ~ 72995735 (+)
G437327 NA other downstream 1729307 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 3036210 74729349 ~ 74770168 (+)
G438719 NA other downstream 3045015 74772009 ~ 74776469 (+)

Expression


Co-expression Network